abortTOPPTool() | TOPPViewBase | protectedslot |
add_2d_context_ | TOPPViewBase | protected |
addData(FeatureMapSharedPtrType feature_map, ConsensusMapSharedPtrType consensus_map, std::vector< PeptideIdentification > &peptides, ExperimentSharedPtrType peak_map, ODExperimentSharedPtrType on_disc_peak_map, LayerDataBase::DataType data_type, bool show_as_1d, bool show_options, bool as_new_window=true, const String &filename="", const String &caption="", UInt window_id=0, Size spectrum_id=0) | TOPPViewBase | |
addDataFile(const String &filename, bool show_options, bool add_to_recent, String caption="", UInt window_id=0, Size spectrum_id=0) | TOPPViewBase | |
addRecentFile_(const String &filename) | TOPPViewBase | protected |
addToolParamsToIni_() | TOPPViewBase | protected |
annotateWithAMS() | TOPPViewBase | slot |
annotateWithID() | TOPPViewBase | slot |
annotateWithOSW() | TOPPViewBase | slot |
CAPTION_3D_SUFFIX_ | TOPPViewBase | privatestatic |
changeLabel(QAction *) | TOPPViewBase | slot |
changeLayerFlag(bool) | TOPPViewBase | slot |
changeUnassigned(QAction *) | TOPPViewBase | slot |
check_defaults_ | DefaultParamHandler | protected |
checkPreferences_() | TOPPViewBase | protected |
chooseFilesDialog_(const String &path_overwrite="") | TOPPViewBase | protected |
closeByTab(int id) | TOPPViewBase | protectedslot |
closeEvent(QCloseEvent *event) override | TOPPViewBase | protected |
closeTab() | TOPPViewBase | slot |
ConsensusMapSharedPtrType typedef | TOPPViewBase | |
ConsensusMapType typedef | TOPPViewBase | |
copyLayer(const QMimeData *data, QWidget *source, int id=-1) | TOPPViewBase | protectedslot |
current_path_ | TOPPViewBase | protected |
DefaultParamHandler(const String &name) | DefaultParamHandler | |
DefaultParamHandler(const DefaultParamHandler &rhs) | DefaultParamHandler | |
DefaultParamHandler() | DefaultParamHandler | private |
defaults_ | DefaultParamHandler | protected |
defaultsToParam_() | DefaultParamHandler | protected |
dm_elements_2d_ | TOPPViewBase | protected |
dm_hull_2d_ | TOPPViewBase | protected |
dm_hulls_2d_ | TOPPViewBase | protected |
dm_ident_2d_ | TOPPViewBase | protected |
dm_label_2d_ | TOPPViewBase | protected |
dm_precursors_2d_ | TOPPViewBase | protected |
dm_unassigned_2d_ | TOPPViewBase | protected |
draw_group_1d_ | TOPPViewBase | protected |
editMetadata() | TOPPViewBase | slot |
error_name_ | DefaultParamHandler | protected |
ExperimentSharedPtrType typedef | TOPPViewBase | |
ExperimentType typedef | TOPPViewBase | |
FeatureMapSharedPtrType typedef | TOPPViewBase | |
FeatureMapType typedef | TOPPViewBase | |
fileChanged_(const String &) | TOPPViewBase | protectedslot |
filter_dock_widget_ | TOPPViewBase | protected |
filter_list_ | TOPPViewBase | protected |
finishTOPPToolExecution(int exitCode, QProcess::ExitStatus exitStatus) | TOPPViewBase | protectedslot |
getActive1DWidget() const | TOPPViewBase | |
getActive2DWidget() const | TOPPViewBase | |
getActive3DWidget() const | TOPPViewBase | |
getActiveCanvas() const | TOPPViewBase | |
getActivePlotWidget() const | TOPPViewBase | |
getCanvasParameters(UInt dim) const | TOPPViewBase | |
getCurrentLayer() const | TOPPViewBase | |
getCurrentLayer() | TOPPViewBase | |
getDefaults() const | DefaultParamHandler | |
getName() const | DefaultParamHandler | |
getParameters() const | DefaultParamHandler | |
getSubsections() const | DefaultParamHandler | |
getWorkspace() | TOPPViewBase | |
group_label_2d_ | TOPPViewBase | protected |
group_unassigned_2d_ | TOPPViewBase | protected |
initializeDefaultParameters_() | TOPPViewBase | protected |
intensity_button_group_ | TOPPViewBase | protected |
lastActiveSubwindow_ | TOPPViewBase | protected |
layer_dock_widget_ | TOPPViewBase | protected |
layerActivated() | TOPPViewBase | slot |
layerDeactivated() | TOPPViewBase | slot |
layerFilterVisibilityChange(bool) const | TOPPViewBase | slot |
layers_view_ | TOPPViewBase | protected |
layerStatistics() const | TOPPViewBase | slot |
layerZoomChanged() const | TOPPViewBase | slot |
linkZoom() | TOPPViewBase | slot |
LOAD_RESULT enum name | TOPPViewBase | |
loadFiles(const StringList &list, QSplashScreen *splash_screen) | TOPPViewBase | |
loadPreferences(String filename="") | TOPPViewBase | |
log_ | TOPPViewBase | protected |
menu_ | TOPPViewBase | protected |
message_label_ | TOPPViewBase | protected |
metadataFileDialog() | TOPPViewBase | slot |
mz_label_ | TOPPViewBase | protected |
ODExperimentSharedPtrType typedef | TOPPViewBase | |
openFile(const String &filename) | TOPPViewBase | slot |
openFilesByDialog(const String &initial_directory="") | TOPPViewBase | slot |
operator=(const DefaultParamHandler &rhs) | DefaultParamHandler | virtual |
operator==(const DefaultParamHandler &rhs) const | DefaultParamHandler | virtual |
param_ | DefaultParamHandler | protected |
preferencesDialog() | TOPPViewBase | slot |
projections_2d_ | TOPPViewBase | protected |
recent_files_ | TOPPViewBase | protected |
rerunTOPPTool() | TOPPViewBase | slot |
resetZoom() const | TOPPViewBase | slot |
rt_label_ | TOPPViewBase | protected |
runTOPPTool_() | TOPPViewBase | protected |
saveLayerAll() const | TOPPViewBase | slot |
saveLayerVisible() const | TOPPViewBase | slot |
savePreferences() | TOPPViewBase | |
scan_mode_ | TOPPViewBase | protected |
selection_view_ | TOPPViewBase | protected |
setDrawMode1D(int) const | TOPPViewBase | slot |
setIntensityMode(int) | TOPPViewBase | slot |
setName(const String &name) | DefaultParamHandler | |
setParameters(const Param ¶m) | DefaultParamHandler | |
showCurrentPeaksAs2D() | TOPPViewBase | slot |
showCurrentPeaksAs3D() | TOPPViewBase | slot |
showCurrentPeaksAsDIA() | TOPPViewBase | slot |
showCurrentPeaksAsIonMobility() | TOPPViewBase | slot |
showCursorStatus(double mz, double rt) | TOPPViewBase | slot |
showCursorStatusInvert(double mz, double rt) | TOPPViewBase | slot |
showGoToDialog() const | TOPPViewBase | slot |
showPlotWidgetInWindow(PlotWidget *sw, const String &caption) | TOPPViewBase | |
showPreferences() const | TOPPViewBase | slot |
showSpectrumAlignmentDialog() | TOPPViewBase | slot |
showSpectrumBrowser() | TOPPViewBase | protectedslot |
showSpectrumGenerationDialog() | TOPPViewBase | slot |
showSpectrumMetaData(int spectrum_index) const | TOPPViewBase | slot |
showStatusMessage(std::string msg, OpenMS::UInt time) | TOPPViewBase | slot |
showTOPPDialog() | TOPPViewBase | slot |
showTOPPDialog_(bool visible) | TOPPViewBase | protected |
showWindow(int id) | TOPPViewBase | protectedslot |
SpectrumType typedef | TOPPViewBase | |
subsections_ | DefaultParamHandler | protected |
tab_bar_ | TOPPViewBase | protected |
TestTOPPView class | TOPPViewBase | friend |
toggleAxisLegends() const | TOPPViewBase | slot |
toggleGridLines() const | TOPPViewBase | slot |
toggleInterestingMZs() const | TOPPViewBase | slot |
toggleProjections() | TOPPViewBase | slot |
tool_bar_ | TOPPViewBase | protected |
tool_bar_1d_ | TOPPViewBase | protected |
tool_bar_2d_cons_ | TOPPViewBase | protected |
tool_bar_2d_feat_ | TOPPViewBase | protected |
tool_bar_2d_ident_ | TOPPViewBase | protected |
tool_bar_2d_peak_ | TOPPViewBase | protected |
TOOL_SCAN enum name | TOPPViewBase | |
tool_scanner_ | TOPPViewBase | protected |
topp_ | TOPPViewBase | protected |
TOPPViewBase(TOOL_SCAN scan_mode=TOOL_SCAN::SCAN_IF_NEWER_VERSION, QWidget *parent=nullptr) | TOPPViewBase | explicit |
updateBarsAndMenus() | TOPPViewBase | slot |
updateCurrentPath() | TOPPViewBase | slot |
updateFilterBar() | TOPPViewBase | slot |
updateLayerBar() | TOPPViewBase | slot |
updateMembers_() | DefaultParamHandler | protectedvirtual |
updateMenu() | TOPPViewBase | slot |
updateProcessLog() | TOPPViewBase | protectedslot |
updateToolBar() | TOPPViewBase | slot |
updateViewBar() | TOPPViewBase | slot |
views_dockwidget_ | TOPPViewBase | protected |
warn_empty_defaults_ | DefaultParamHandler | protected |
watcher_ | TOPPViewBase | protected |
watcher_msgbox_ | TOPPViewBase | protected |
writeParametersToMetaValues(const Param &write_this, MetaInfoInterface &write_here, const String &key_prefix="") | DefaultParamHandler | static |
ws_ | TOPPViewBase | protected |
zoom_together_ | TOPPViewBase | protected |
~DefaultParamHandler() | DefaultParamHandler | virtual |
~TOPPViewBase() override | TOPPViewBase | |