activate1DSpectrum(int spectrum_index, int peptide_id_index, int peptide_hit_index) | TVIdentificationViewController | virtualslot |
activate1DSpectrum(int index) | TVIdentificationViewController | virtualslot |
activateBehavior() override | TVIdentificationViewController | slot |
addPeakAnnotations_(const std::vector< PeptideIdentification > &ph) | TVIdentificationViewController | private |
addPeakAnnotationsFromID_(const PeptideHit &hit) | TVIdentificationViewController | private |
addPrecursorLabels1D_(const std::vector< Precursor > &pcs) | TVIdentificationViewController | private |
addTheoreticalSpectrumLayer_(const PeptideHit &ph) | TVIdentificationViewController | private |
collapseStringVector(std::vector< String > strings) | TVIdentificationViewController | private |
ConsensusMapSharedPtrType typedef | TVControllerBase | |
ConsensusMapType typedef | TVControllerBase | |
deactivate1DSpectrum(int index) | TVIdentificationViewController | virtualslot |
deactivateBehavior() override | TVIdentificationViewController | slot |
ExperimentSharedPtrType typedef | TVControllerBase | |
ExperimentType typedef | TVControllerBase | |
extractCoverageStrings(std::vector< PeptideHit::PeakAnnotation > frag_annotations, String &alpha_string, String &beta_string, Size alpha_size, Size beta_size) | TVIdentificationViewController | private |
FeatureMapSharedPtrType typedef | TVControllerBase | |
FeatureMapType typedef | TVControllerBase | |
generateSequenceDiagram_(const SeqType &seq, const std::vector< PeptideHit::PeakAnnotation > &annotations, const StringList &top_ions, const StringList &bottom_ions) | TVIdentificationViewController | private |
generateSequenceRow_(const AASequence &seq, std::vector< String > &row) | TVIdentificationViewController | private |
generateSequenceRow_(const NASequence &seq, std::vector< String > &row) | TVIdentificationViewController | private |
n_times(Size n, String input) | TVIdentificationViewController | private |
removeGraphicalPeakAnnotations_(int spectrum_index) | TVIdentificationViewController | private |
removeTemporaryAnnotations_(Size spectrum_index) | TVIdentificationViewController | private |
removeTheoreticalSpectrumLayer_() | TVIdentificationViewController | private |
setVisibleArea1D(double l, double h) | TVIdentificationViewController | slot |
showSpectrumAsNew1D(int spectrum_index, int peptide_id_index, int peptide_hit_index) | TVIdentificationViewController | virtualslot |
showSpectrumAsNew1D(int index) | TVIdentificationViewController | virtualslot |
spec_id_view_ | TVIdentificationViewController | private |
SpectrumType typedef | TVControllerBase | |
temporary_annotations_ | TVIdentificationViewController | private |
tv_ | TVControllerBase | protected |
TVControllerBase()=delete | TVControllerBase | |
TVControllerBase(TOPPViewBase *parent) | TVControllerBase | protected |
TVIdentificationViewController(TOPPViewBase *parent, SpectraIDViewTab *spec_id_view_) | TVIdentificationViewController | |
~TVControllerBase() override=default | TVControllerBase | |