ToolDescription.h

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// --------------------------------------------------------------------------
//                   OpenMS -- Open-Source Mass Spectrometry
// --------------------------------------------------------------------------
// Copyright The OpenMS Team -- Eberhard Karls University Tuebingen,
// ETH Zurich, and Freie Universitaet Berlin 2002-2023.
//
// This software is released under a three-clause BSD license:
//  * Redistributions of source code must retain the above copyright
//    notice, this list of conditions and the following disclaimer.
//  * Redistributions in binary form must reproduce the above copyright
//    notice, this list of conditions and the following disclaimer in the
//    documentation and/or other materials provided with the distribution.
//  * Neither the name of any author or any participating institution
//    may be used to endorse or promote products derived from this software
//    without specific prior written permission.
// For a full list of authors, refer to the file AUTHORS.
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// THIS SOFTWARE IS PROVIDED BY THE COPYRIGHT HOLDERS AND CONTRIBUTORS "AS IS"
// AND ANY EXPRESS OR IMPLIED WARRANTIES, INCLUDING, BUT NOT LIMITED TO, THE
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// EXEMPLARY, OR CONSEQUENTIAL DAMAGES (INCLUDING, BUT NOT LIMITED TO,
// PROCUREMENT OF SUBSTITUTE GOODS OR SERVICES; LOSS OF USE, DATA, OR PROFITS;
// OR BUSINESS INTERRUPTION) HOWEVER CAUSED AND ON ANY THEORY OF LIABILITY,
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// --------------------------------------------------------------------------
// $Maintainer: Chris Bielow $
// $Authors: Chris Bielow, Mathias Walzer $
// --------------------------------------------------------------------------
 
#pragma once
 
#include <OpenMS/DATASTRUCTURES/Param.h>
#include <OpenMS/DATASTRUCTURES/String.h>
#include <OpenMS/DATASTRUCTURES/ListUtils.h>
 
#include <OpenMS/OpenMSConfig.h>
 
#include <map>
 
namespace OpenMS
{
  namespace Internal
  {
    struct FileMapping
    {
      String location; 
      String target; 
      // thus: move location -> target
 
      FileMapping() = default;
 
      FileMapping(const FileMapping& other) = default;
 
      FileMapping& operator=(const FileMapping& rhs) = default;
    };
 
    struct MappingParam
    {
      std::map<Int, String> mapping;
      std::vector<FileMapping> pre_moves;
      std::vector<FileMapping> post_moves;
 
      MappingParam() = default;
 
      MappingParam(const MappingParam& other) = default;
 
      MappingParam& operator=(const MappingParam& other) = default;  
    };
 
    struct OPENMS_DLLAPI ToolDescriptionInternal
    {
      bool is_internal = false;
      String name;
      String category;
      StringList types; 
 
      ToolDescriptionInternal() = default;
 
      ToolDescriptionInternal(const bool p_is_internal, const String& p_name, const String& p_category, const StringList& p_types);
 
      ToolDescriptionInternal(const String& p_name, const StringList& p_types);
 
      ToolDescriptionInternal& operator=(const ToolDescriptionInternal& rhs) = default;
 
      bool operator==(const ToolDescriptionInternal& rhs) const;
 
      bool operator<(const ToolDescriptionInternal& rhs) const;
    };
 
    struct OPENMS_DLLAPI ToolExternalDetails
    {
      String text_startup;
      String text_fail;
      String text_finish;
      String category;
      String commandline;
      String path; 
      String working_directory; 
      MappingParam tr_table;
      Param param;
    };
 
    struct OPENMS_DLLAPI ToolDescription :
      ToolDescriptionInternal
    {
      std::vector<ToolExternalDetails> external_details;
 
      ToolDescription() = default;
 
      ToolDescription(const ToolDescription& other) = default;
 
      ToolDescription(const String& p_name, const String& p_category, const StringList& p_types = StringList());
 
      ToolDescription& operator=(const ToolDescription& rhs) = default;
 
      void addExternalType(const String& type, const ToolExternalDetails& details);
 
      void append(const ToolDescription& other);
    };
  } // namespace Internal
} // namespace OPENMS