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FeatureMap Member List

This is the complete list of members for FeatureMap, including all inherited members.

addMetaValues(const MetaInfoInterface &from)MetaInfoInterface
applyFunctionOnPeptideHits(T &&f, bool include_unassigned=true)MapUtilities< FeatureMap >inline
applyFunctionOnPeptideHits(T &&f, bool include_unassigned=true) constMapUtilities< FeatureMap >inline
applyFunctionOnPeptideHits_(std::vector< PeptideIdentification > &idvec, T &&f)MapUtilities< FeatureMap >inlineprivate
applyFunctionOnPeptideHits_(const std::vector< PeptideIdentification > &idvec, T &&f) constMapUtilities< FeatureMap >inlineprivate
applyFunctionOnPeptideIDs(T &&f, bool include_unassigned=true)MapUtilities< FeatureMap >inline
applyFunctionOnPeptideIDs(T &&f, bool include_unassigned=true) constMapUtilities< FeatureMap >inline
applyFunctionOnPeptideIDs_(std::vector< PeptideIdentification > &idvec, T &&f)MapUtilities< FeatureMap >inlineprivate
applyFunctionOnPeptideIDs_(const std::vector< PeptideIdentification > &idvec, T &&f) constMapUtilities< FeatureMap >inlineprivate
applyMemberFunction(Size(Type::*member_function)())FeatureMapinline
applyMemberFunction(Size(Type::*member_function)() const) constFeatureMapinline
assign(const RangeManager< RangeBasesOther... > &rhs)RangeManager< RangeBases... >inline
assignUnsafe(const RangeManager< RangeBasesOther... > &rhs)RangeManager< RangeBases... >inline
at(size_t i)ExposedVector< Feature >inline
at(size_t i) constExposedVector< Feature >inline
back() noexceptExposedVector< Feature >inline
back() const noexceptExposedVector< Feature >inline
begin() noexceptExposedVector< Feature >inline
begin() const noexceptExposedVector< Feature >inline
cbegin() const noexceptExposedVector< Feature >inline
cend() const noexceptExposedVector< Feature >inline
clampTo(const RangeManager< RangeBasesOther... > &rhs)RangeManager< RangeBases... >inline
clampToUnsafe(const RangeManager< RangeBasesOther... > &rhs)RangeManager< RangeBases... >inline
clear(bool clear_meta_data=true)FeatureMap
RangeManagerContainer< RangeRT, RangeMZ, RangeIntensity >::clear(const DIM_UNIT range)RangeManager< RangeBases... >inline
clearMetaInfo()MetaInfoInterface
clearRanges()RangeManager< RangeBases... >inline
clearUniqueId()UniqueIdInterfaceinline
const_iterator typedefExposedVector< Feature >
const_reference typedefExposedVector< Feature >
const_reverse_iterator typedefExposedVector< Feature >
ConstIterator typedefFeatureMap
ConstReverseIterator typedefFeatureMap
containsAll(const RangeManager< RangeBasesOther... > &rhs) constRangeManager< RangeBases... >inline
createIfNotExists_()MetaInfoInterfaceinlineprotected
data_ExposedVector< Feature >protected
data_processing_FeatureMapprotected
difference_type typedefExposedVector< Feature >
DocumentIdentifier()DocumentIdentifier
DocumentIdentifier(const DocumentIdentifier &)=defaultDocumentIdentifier
DocumentIdentifier(DocumentIdentifier &&)=defaultDocumentIdentifier
emplace_back(Args &&... args)ExposedVector< Feature >inline
empty() const noexceptExposedVector< Feature >inline
end() noexceptExposedVector< Feature >inline
end() const noexceptExposedVector< Feature >inline
ensureUniqueId()UniqueIdInterface
erase(const_iterator where) noexceptExposedVector< Feature >inline
erase(const_iterator from, const_iterator to) noexceptExposedVector< Feature >inline
ExposedVector()=defaultExposedVector< Feature >
ExposedVector(const size_t n)ExposedVector< Feature >inlineexplicit
ExposedVector(const size_t n, const Feature &val)ExposedVector< Feature >inline
ExposedVector(Iter begin, Iter end)ExposedVector< Feature >inline
ExposedVector(const ExposedVector &rhs)=defaultExposedVector< Feature >
ExposedVector(ExposedVector &&rhs) noexcept=defaultExposedVector< Feature >
extend(const RangeManager< RangeBasesOther... > &rhs)RangeManager< RangeBases... >inline
extendUnsafe(const RangeManager< RangeBasesOther... > &rhs)RangeManager< RangeBases... >inline
FeatureMap()FeatureMap
FeatureMap(const FeatureMap &source)FeatureMap
FeatureMap(FeatureMap &&source)FeatureMap
file_path_DocumentIdentifierprotected
file_type_DocumentIdentifierprotected
for_each_base_(Visitor &&visitor)RangeManager< RangeBases... >inlineprotected
for_each_base_(Visitor &&visitor) constRangeManager< RangeBases... >inlineprotected
getAnnotationStatistics() constFeatureMap
getBase_() constUniqueIdIndexer< FeatureMap >inlineprotected
getBase_()UniqueIdIndexer< FeatureMap >inlineprotected
getData() constExposedVector< Feature >inline
getData()ExposedVector< Feature >inline
getDataProcessing() constFeatureMap
getDataProcessing()FeatureMap
getIdentificationData() constFeatureMap
getIdentificationData()FeatureMap
getIdentifier() constDocumentIdentifier
getKeys(std::vector< String > &keys) constMetaInfoInterface
getKeys(std::vector< UInt > &keys) constMetaInfoInterface
getLoadedFilePath() constDocumentIdentifier
getLoadedFileType() constDocumentIdentifier
getMetaValue(const String &name) constMetaInfoInterface
getMetaValue(const String &name, const DataValue &default_value) constMetaInfoInterface
getMetaValue(UInt index) constMetaInfoInterface
getMetaValue(UInt index, const DataValue &default_value) constMetaInfoInterface
getPrimaryMSRunPath(StringList &toFill) constFeatureMap
getProteinIdentifications() constFeatureMap
getProteinIdentifications()FeatureMap
getRange() constRangeManagerContainer< RangeRT, RangeMZ, RangeIntensity >inline
getRange()RangeManagerContainer< RangeRT, RangeMZ, RangeIntensity >inline
getRangeForDim(MSDim dim) constRangeManager< RangeBases... >inline
getRangeForDim(MSDim dim)RangeManager< RangeBases... >inline
getUnassignedIDMatches() constFeatureMap
getUnassignedPeptideIdentifications() constFeatureMap
getUnassignedPeptideIdentifications()FeatureMap
getUniqueId() constUniqueIdInterfaceinline
hasInvalidUniqueId() constUniqueIdInterfaceinline
hasRange() constRangeManager< RangeBases... >inline
hasValidUniqueId() constUniqueIdInterfaceinline
id_DocumentIdentifierprotected
id_data_FeatureMapprotected
insert(const_iterator where, T from, T to)ExposedVector< Feature >inline
INVALID enum valueUniqueIdInterface
isMetaEmpty() constMetaInfoInterface
isValid(UInt64 unique_id)UniqueIdInterfaceinlinestatic
iterator typedefExposedVector< Feature >
Iterator typedefFeatureMap
meta_MetaInfoInterfaceprotected
MetaInfoInterface()MetaInfoInterface
MetaInfoInterface(const MetaInfoInterface &rhs)MetaInfoInterface
MetaInfoInterface(MetaInfoInterface &&) noexceptMetaInfoInterface
metaRegistry()MetaInfoInterfacestatic
metaValueExists(const String &name) constMetaInfoInterface
metaValueExists(UInt index) constMetaInfoInterface
minSpanIfSingular(const double min_span)RangeManager< RangeBases... >inline
operator!=(const FeatureMap &rhs) constFeatureMap
OpenMS::MetaInfoInterface::operator!=(const MetaInfoInterface &rhs) constMetaInfoInterface
RangeManagerContainer< RangeRT, RangeMZ, RangeIntensity >::operator!=(const RangeManager &rhs) constRangeManager< RangeBases... >inline
operator+(const FeatureMap &rhs) constFeatureMap
operator+=(const FeatureMap &rhs)FeatureMap
operator=(const FeatureMap &rhs)FeatureMap
OpenMS::MetaInfoInterface::operator=(const MetaInfoInterface &rhs)MetaInfoInterface
OpenMS::MetaInfoInterface::operator=(MetaInfoInterface &&) noexceptMetaInfoInterface
OpenMS::DocumentIdentifier::operator=(const DocumentIdentifier &)=defaultDocumentIdentifier
OpenMS::DocumentIdentifier::operator=(DocumentIdentifier &&) &=defaultDocumentIdentifier
ExposedVector< Feature >::operator=(const ExposedVector &rhs)=defaultExposedVector< Feature >
ExposedVector< Feature >::operator=(ExposedVector &&rhs) noexcept=defaultExposedVector< Feature >
OpenMS::UniqueIdInterface::operator=(UniqueIdInterface const &rhs)=defaultUniqueIdInterface
OpenMS::UniqueIdInterface::operator=(UniqueIdInterface &&) &=defaultUniqueIdInterface
operator==(const FeatureMap &rhs) constFeatureMap
OpenMS::MetaInfoInterface::operator==(const MetaInfoInterface &rhs) constMetaInfoInterface
RangeManagerContainer< RangeRT, RangeMZ, RangeIntensity >::operator==(const RangeManager &rhs) constRangeManager< RangeBases... >inline
OpenMS::DocumentIdentifier::operator==(const DocumentIdentifier &rhs) constDocumentIdentifier
OpenMS::UniqueIdInterface::operator==(UniqueIdInterface const &rhs) constUniqueIdInterfaceinline
operator[](size_t i) noexceptExposedVector< Feature >inline
operator[](size_t i) const noexceptExposedVector< Feature >inline
pointer typedefExposedVector< Feature >
pop_back() noexceptExposedVector< Feature >inline
printRange(std::ostream &out) constRangeManager< RangeBases... >inline
protein_identifications_FeatureMapprotected
push_back(const Feature &f)ExposedVector< Feature >inline
push_back(Feature &&f)ExposedVector< Feature >inline
pushInto(const RangeManager< RangeBasesOther... > &sandbox)RangeManager< RangeBases... >inline
pushIntoUnsafe(const RangeManager< RangeBasesOther... > &rhs)RangeManager< RangeBases... >inline
RangeManagerContainerType typedefFeatureMap
RangeManagerType typedefFeatureMap
reference typedefExposedVector< Feature >
removeMetaValue(const String &name)MetaInfoInterface
removeMetaValue(UInt index)MetaInfoInterface
reserve(const size_t new_size)ExposedVector< Feature >inline
resize(const size_t new_size)ExposedVector< Feature >inline
resolveUniqueIdConflicts()UniqueIdIndexer< FeatureMap >inline
reverse_iterator typedefExposedVector< Feature >
ReverseIterator typedefFeatureMap
scaleBy(const double factor)RangeManager< RangeBases... >inline
setDataProcessing(const std::vector< DataProcessing > &processing_method)FeatureMap
setIdentifier(const String &id)DocumentIdentifier
setLoadedFilePath(const String &file_name)DocumentIdentifier
setLoadedFileType(const String &file_name)DocumentIdentifier
setMetaValue(const String &name, const DataValue &value)MetaInfoInterface
setMetaValue(UInt index, const DataValue &value)MetaInfoInterface
setPrimaryMSRunPath(const StringList &s)FeatureMap
setPrimaryMSRunPath(const StringList &s, MSExperiment &e)FeatureMap
setProteinIdentifications(const std::vector< ProteinIdentification > &protein_identifications)FeatureMap
setUnassignedPeptideIdentifications(const std::vector< PeptideIdentification > &unassigned_peptide_identifications)FeatureMap
setUniqueId()UniqueIdInterface
setUniqueId(UInt64 rhs)UniqueIdInterfaceinline
setUniqueId(const String &rhs)UniqueIdInterface
size() const noexceptExposedVector< Feature >inline
size_type typedefExposedVector< Feature >
sortByIntensity(bool reverse=false)FeatureMap
sortByMZ()FeatureMap
sortByOverallQuality(bool reverse=false)FeatureMap
sortByPosition()FeatureMap
sortByRT()FeatureMap
static_for_each_base_(Visitor &&visitor)RangeManager< RangeBases... >inlineprotectedstatic
swap(FeatureMap &from)FeatureMap
OpenMS::MetaInfoInterface::swap(MetaInfoInterface &rhs)MetaInfoInterface
OpenMS::DocumentIdentifier::swap(DocumentIdentifier &from)DocumentIdentifier
OpenMS::UniqueIdInterface::swap(UniqueIdInterface &from)UniqueIdInterfaceinline
UniqueIdIndexer< FeatureMap >::swap(UniqueIdIndexer &rhs)UniqueIdIndexer< FeatureMap >inline
swapFeaturesOnly(FeatureMap &from)FeatureMap
ThisRangeType typedefRangeManagerContainer< RangeRT, RangeMZ, RangeIntensity >
unassigned_peptide_identifications_FeatureMapprotected
unique_id_UniqueIdInterfaceprotected
uniqueid_to_index_UniqueIdIndexer< FeatureMap >mutableprotected
UniqueIdInterface()UniqueIdInterfaceinline
UniqueIdInterface(const UniqueIdInterface &rhs)=defaultUniqueIdInterface
UniqueIdInterface(UniqueIdInterface &&rhs)=defaultUniqueIdInterface
UniqueIdMap typedefUniqueIdIndexer< FeatureMap >
uniqueIdToIndex(UInt64 unique_id) constUniqueIdIndexer< FeatureMap >inline
updateRanges() overrideFeatureMapvirtual
updateUniqueIdToIndex() constUniqueIdIndexer< FeatureMap >inline
value_type typedefExposedVector< Feature >
VecMember typedefExposedVector< Feature >
~DocumentIdentifier()DocumentIdentifiervirtual
~FeatureMap() overrideFeatureMap
~MetaInfoInterface()MetaInfoInterface
~RangeManagerContainer()=defaultRangeManagerContainer< RangeRT, RangeMZ, RangeIntensity >virtual
~UniqueIdInterface()=defaultUniqueIdInterfacevirtual