IonizationSimulation Member List

This is the complete list of members for IonizationSimulation, including all inherited members.

basic_residues_	IonizationSimulation	private
check_defaults_	DefaultParamHandler	protected
CMD enum value	ProgressLogger
countIonizedResidues_(const AASequence &) const	IonizationSimulation	private
current_logger_	ProgressLogger	mutableprotected
DefaultParamHandler(const String &name)	DefaultParamHandler
DefaultParamHandler(const DefaultParamHandler &rhs)	DefaultParamHandler
DefaultParamHandler()	DefaultParamHandler	private
defaults_	DefaultParamHandler	protected
defaultsToParam_()	DefaultParamHandler	protected
endProgress() const	ProgressLogger
error_name_	DefaultParamHandler	protected
ESI enum value	IonizationSimulation
esi_adducts_	IonizationSimulation	private
esi_impurity_probabilities_	IonizationSimulation	private
esi_probability_	IonizationSimulation	private
getDefaults() const	DefaultParamHandler
getLogType() const	ProgressLogger
getName() const	DefaultParamHandler
getParameters() const	DefaultParamHandler
getSubsections() const	DefaultParamHandler
GUI enum value	ProgressLogger
ionization_type_	IonizationSimulation	private
IonizationSimulation()	IonizationSimulation
IonizationSimulation(SimTypes::MutableSimRandomNumberGeneratorPtr)	IonizationSimulation	explicit
IonizationSimulation(const IonizationSimulation &source)	IonizationSimulation
IonizationType enum name	IonizationSimulation
ionize(SimTypes::FeatureMapSim &features, ConsensusMap &charge_consensus, SimTypes::MSSimExperiment &experiment)	IonizationSimulation
ionizeEsi_(SimTypes::FeatureMapSim &, ConsensusMap &charge_consensus)	IonizationSimulation	private
ionizeMaldi_(SimTypes::FeatureMapSim &, ConsensusMap &charge_consensus)	IonizationSimulation	private
isFeatureValid_(const Feature &feature) const	IonizationSimulation	inlineprivate
last_invoke_	ProgressLogger	mutableprotected
LogType enum name	ProgressLogger
logTypeToFactoryName_(LogType type)	ProgressLogger	protectedstatic
MALDI enum value	IonizationSimulation
maldi_probabilities_	IonizationSimulation	private
max_adduct_charge_	IonizationSimulation	private
maximal_mz_measurement_limit_	IonizationSimulation	private
minimal_mz_measurement_limit_	IonizationSimulation	private
nextProgress() const	ProgressLogger
NONE enum value	ProgressLogger
operator=(const IonizationSimulation &source)	IonizationSimulation
OpenMS::DefaultParamHandler::operator=(const DefaultParamHandler &rhs)	DefaultParamHandler
OpenMS::ProgressLogger::operator=(const ProgressLogger &other)	ProgressLogger
operator==(const DefaultParamHandler &rhs) const	DefaultParamHandler	virtual
param_	DefaultParamHandler	protected
ProgressLogger()	ProgressLogger
ProgressLogger(const ProgressLogger &other)	ProgressLogger
recursion_depth_	ProgressLogger	protectedstatic
rnd_gen_	IonizationSimulation	protected
setDefaultParams_()	IonizationSimulation	private
setFeatureProperties_(Feature &f, const double &adduct_mass, const String &adduct_formula, const SimTypes::SimChargeType charge, const SimTypes::SimIntensityType new_intensity, const Size parent_index)	IonizationSimulation	private
setLogType(LogType type) const	ProgressLogger
setName(const String &name)	DefaultParamHandler
setParameters(const Param &param)	DefaultParamHandler
setProgress(SignedSize value) const	ProgressLogger
startProgress(SignedSize begin, SignedSize end, const String &label) const	ProgressLogger
subsections_	DefaultParamHandler	protected
type_	ProgressLogger	mutableprotected
updateMembers_() override	IonizationSimulation	privatevirtual
warn_empty_defaults_	DefaultParamHandler	protected
writeParametersToMetaValues(const Param &write_this, MetaInfoInterface &write_here, const String &key_prefix="")	DefaultParamHandler	static
~DefaultParamHandler()	DefaultParamHandler	virtual
~IonizationSimulation() override	IonizationSimulation
~ProgressLogger()	ProgressLogger	virtual