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O18Labeler Member List
This is the complete list of members for
O18Labeler
, including all inherited members.
addModificationToPeptideHit_
(Feature &feature, const String &modification) const
O18Labeler
protected
BaseLabeler
()
BaseLabeler
channel_description_
BaseLabeler
protected
check_defaults_
DefaultParamHandler
protected
consensus_
BaseLabeler
protected
create
()
O18Labeler
inline
static
DefaultParamHandler
(const String &name)
DefaultParamHandler
DefaultParamHandler
(const DefaultParamHandler &rhs)
DefaultParamHandler
DefaultParamHandler
()
DefaultParamHandler
private
defaults_
DefaultParamHandler
protected
defaultsToParam_
()
DefaultParamHandler
protected
error_name_
DefaultParamHandler
protected
getChannelIntensityName
(const Size channel_index) const
BaseLabeler
getConsensus
()
BaseLabeler
getDefaultParameters
() const
BaseLabeler
virtual
getDefaults
() const
DefaultParamHandler
getDescription
() const
BaseLabeler
getName
() const
DefaultParamHandler
getParameters
() const
DefaultParamHandler
getProductName
()
O18Labeler
inline
static
getSubsections
() const
DefaultParamHandler
HEAVY_CHANNEL_ID_
O18Labeler
private
static
LIGHT_CHANNEL_ID_
O18Labeler
private
static
MEDIUM_CHANNEL_ID_
O18Labeler
private
static
mergeFeatures_
(Feature &labeled_channel_feature, const AASequence &unmodified_sequence, std::map< AASequence, Feature > &unlabeled_features_index) const
O18Labeler
protected
mergeProteinAccessions_
(Feature &target, const Feature &source) const
BaseLabeler
protected
mergeProteinIdentificationsMaps_
(const SimTypes::FeatureMapSimVector &maps)
BaseLabeler
protected
O18Labeler
()
O18Labeler
operator=
(const DefaultParamHandler &rhs)
DefaultParamHandler
operator==
(const DefaultParamHandler &rhs) const
DefaultParamHandler
virtual
param_
DefaultParamHandler
protected
postDetectabilityHook
(SimTypes::FeatureMapSimVector &) override
O18Labeler
virtual
postDigestHook
(SimTypes::FeatureMapSimVector &) override
O18Labeler
virtual
postIonizationHook
(SimTypes::FeatureMapSimVector &) override
O18Labeler
virtual
postRawMSHook
(SimTypes::FeatureMapSimVector &) override
O18Labeler
virtual
postRawTandemMSHook
(SimTypes::FeatureMapSimVector &, SimTypes::MSSimExperiment &) override
O18Labeler
virtual
postRTHook
(SimTypes::FeatureMapSimVector &) override
O18Labeler
virtual
preCheck
(Param ¶m) const override
O18Labeler
virtual
recomputeConsensus_
(const SimTypes::FeatureMapSim &simulated_features)
BaseLabeler
protected
registerChildren
()
BaseLabeler
static
rng_
BaseLabeler
protected
setName
(const String &name)
DefaultParamHandler
setParameters
(const Param ¶m)
DefaultParamHandler
setRnd
(SimTypes::MutableSimRandomNumberGeneratorPtr rng)
BaseLabeler
virtual
setUpHook
(SimTypes::FeatureMapSimVector &) override
O18Labeler
virtual
subsections_
DefaultParamHandler
protected
updateMembers_
()
DefaultParamHandler
protected
virtual
warn_empty_defaults_
DefaultParamHandler
protected
writeParametersToMetaValues
(const Param &write_this, MetaInfoInterface &write_here, const String &key_prefix="")
DefaultParamHandler
static
~BaseLabeler
() override
BaseLabeler
~DefaultParamHandler
()
DefaultParamHandler
virtual
~O18Labeler
() override
O18Labeler
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