OpenMS
All Classes Namespaces Files Functions Variables Typedefs Enumerations Enumerator Properties Friends Macros Modules Pages
PeptideIdentification Member List

This is the complete list of members for PeptideIdentification, including all inherited members.

addMetaValues(const MetaInfoInterface &from)MetaInfoInterface
assignRanks()PeptideIdentification
base_name_PeptideIdentificationprotected
buildUIDFromPepID(const PeptideIdentification &pep_id, const std::map< String, StringList > &fidentifier_to_msrunpath)PeptideIdentificationstatic
buildUIDsFromAllPepIDs(const ConsensusMap &cmap)PeptideIdentificationstatic
clearMetaInfo()MetaInfoInterface
createIfNotExists_()MetaInfoInterfaceinlineprotected
empty() constPeptideIdentification
getBaseName() constPeptideIdentification
getExperimentLabel() constPeptideIdentification
getHits() constPeptideIdentification
getHits()PeptideIdentification
getIdentifier() constPeptideIdentification
getKeys(std::vector< String > &keys) constMetaInfoInterface
getKeys(std::vector< UInt > &keys) constMetaInfoInterface
getMetaValue(const String &name) constMetaInfoInterface
getMetaValue(const String &name, const DataValue &default_value) constMetaInfoInterface
getMetaValue(UInt index) constMetaInfoInterface
getMetaValue(UInt index, const DataValue &default_value) constMetaInfoInterface
getMZ() constPeptideIdentification
getReferencingHits(const std::vector< PeptideHit > &, const std::set< String > &accession)PeptideIdentificationstatic
getRT() constPeptideIdentification
getScoreType() constPeptideIdentification
getSignificanceThreshold() constPeptideIdentification
hasMZ() constPeptideIdentification
hasRT() constPeptideIdentification
higher_score_better_PeptideIdentificationprotected
hits_PeptideIdentificationprotected
HitType typedefPeptideIdentification
id_PeptideIdentificationprotected
insertHit(const PeptideHit &hit)PeptideIdentification
insertHit(PeptideHit &&hit)PeptideIdentification
isHigherScoreBetter() constPeptideIdentification
isMetaEmpty() constMetaInfoInterface
meta_MetaInfoInterfaceprotected
MetaInfoInterface()MetaInfoInterface
MetaInfoInterface(const MetaInfoInterface &rhs)MetaInfoInterface
MetaInfoInterface(MetaInfoInterface &&) noexceptMetaInfoInterface
metaRegistry()MetaInfoInterfacestatic
metaValueExists(const String &name) constMetaInfoInterface
metaValueExists(UInt index) constMetaInfoInterface
mz_PeptideIdentificationprotected
operator!=(const PeptideIdentification &rhs) constPeptideIdentification
OpenMS::MetaInfoInterface::operator!=(const MetaInfoInterface &rhs) constMetaInfoInterface
operator=(const PeptideIdentification &)=defaultPeptideIdentification
operator=(PeptideIdentification &&)=defaultPeptideIdentification
OpenMS::MetaInfoInterface::operator=(const MetaInfoInterface &rhs)MetaInfoInterface
OpenMS::MetaInfoInterface::operator=(MetaInfoInterface &&) noexceptMetaInfoInterface
operator==(const PeptideIdentification &rhs) constPeptideIdentification
OpenMS::MetaInfoInterface::operator==(const MetaInfoInterface &rhs) constMetaInfoInterface
PeptideIdentification()PeptideIdentification
PeptideIdentification(const PeptideIdentification &)=defaultPeptideIdentification
PeptideIdentification(PeptideIdentification &&) noexcept=defaultPeptideIdentification
removeMetaValue(const String &name)MetaInfoInterface
removeMetaValue(UInt index)MetaInfoInterface
rt_PeptideIdentificationprotected
score_type_PeptideIdentificationprotected
setBaseName(const String &base_name)PeptideIdentification
setExperimentLabel(const String &type)PeptideIdentification
setHigherScoreBetter(bool value)PeptideIdentification
setHits(const std::vector< PeptideHit > &hits)PeptideIdentification
setHits(std::vector< PeptideHit > &&hits)PeptideIdentification
setIdentifier(const String &id)PeptideIdentification
setMetaValue(const String &name, const DataValue &value)MetaInfoInterface
setMetaValue(UInt index, const DataValue &value)MetaInfoInterface
setMZ(double mz)PeptideIdentification
setRT(double rt)PeptideIdentification
setScoreType(const String &type)PeptideIdentification
setSignificanceThreshold(double value)PeptideIdentification
significance_threshold_PeptideIdentificationprotected
sort()PeptideIdentification
sortByRank()PeptideIdentification
swap(MetaInfoInterface &rhs)MetaInfoInterface
~MetaInfoInterface()MetaInfoInterface
~PeptideIdentification() noexceptPeptideIdentificationvirtual