IndexedMzMLFileLoader.h

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// Copyright (c) 2002-2023, The OpenMS Team -- EKU Tuebingen, ETH Zurich, and FU Berlin
// SPDX-License-Identifier: BSD-3-Clause
// 
// --------------------------------------------------------------------------
// $Maintainer: Hannes Roest $
// $Authors: Hannes Roest $
// --------------------------------------------------------------------------
 
#pragma once
 
#include <OpenMS/KERNEL/StandardTypes.h>
#include <OpenMS/FORMAT/OPTIONS/PeakFileOptions.h>
 
namespace OpenMS
{
  class OnDiscMSExperiment;
  typedef OpenMS::OnDiscMSExperiment OnDiscPeakMap;
 
  class OPENMS_DLLAPI IndexedMzMLFileLoader
  {
    public:
 
    IndexedMzMLFileLoader();
 
    ~IndexedMzMLFileLoader();
 
    PeakFileOptions& getOptions();
 
    const PeakFileOptions& getOptions() const;
 
    void setOptions(const PeakFileOptions &);
 
    bool load(const String& filename, OnDiscPeakMap& exp);
 
    void store(const String& filename, OnDiscPeakMap& exp);
 
    void store(const String& filename, PeakMap& exp);
 
private:
 
    PeakFileOptions options_;
 
  };
}