TMTTenPlexQuantitationMethod.h

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// Copyright (c) 2002-2023, The OpenMS Team -- EKU Tuebingen, ETH Zurich, and FU Berlin
// SPDX-License-Identifier: BSD-3-Clause
//
// --------------------------------------------------------------------------
// $Maintainer: Timo Sachsenberg $
// $Authors: Stephan Aiche $
// --------------------------------------------------------------------------
 
#pragma once
 
#include <OpenMS/config.h>
 
#include <OpenMS/ANALYSIS/QUANTITATION/IsobaricQuantitationMethod.h>
 
namespace OpenMS
{
  class OPENMS_DLLAPI TMTTenPlexQuantitationMethod :
    public IsobaricQuantitationMethod
  {
public:
    TMTTenPlexQuantitationMethod();
 
    ~TMTTenPlexQuantitationMethod() override = default;
 
    TMTTenPlexQuantitationMethod(const TMTTenPlexQuantitationMethod& other);
 
    TMTTenPlexQuantitationMethod & operator=(const TMTTenPlexQuantitationMethod& rhs);
 
 
    const String& getMethodName() const override;
 
    const IsobaricChannelList& getChannelInformation() const override;
 
    Size getNumberOfChannels() const override;
 
    Matrix<double> getIsotopeCorrectionMatrix() const override;
 
    Size getReferenceChannel() const override;
 
 
  private:
    IsobaricChannelList channels_;
 
    static const String name_;
 
    Size reference_channel_;
 
    static const std::vector<std::string> channel_names_;
 
  protected:
    void setDefaultParams_();
 
    void updateMembers_() override;
 
  };
} // namespace