IDScoreGetterSetter Member List

This is the complete list of members for IDScoreGetterSetter, including all inherited members.

checkTDAnnotation_(const MetaInfoInterface &id_or_hit)	IDScoreGetterSetter	inlinestatic
fillPeptideScoreMap_(std::unordered_map< String, ScoreToTgtDecLabelPair > &seq_to_score_labels, std::vector< PeptideIdentification > const &ids)	IDScoreGetterSetter	static
fillPeptideScoreMap_(std::unordered_map< String, ScoreToTgtDecLabelPair > &seq_to_score_labels, ConsensusMap const &map, bool include_unassigned)	IDScoreGetterSetter	static
getPeptideScoresFromMap_(ScoreToTgtDecLabelPairs &scores_labels, const ConsensusMap &cmap, bool include_unassigned_peptides, Args &&... args)	IDScoreGetterSetter	inlinestatic
getPickedProteinGroupScores_(const std::unordered_map< String, ScoreToTgtDecLabelPair > &picked_scores, ScoreToTgtDecLabelPairs &scores_labels, const std::vector< ProteinIdentification::ProteinGroup > &grps, const String &decoy_string, bool decoy_prefix)	IDScoreGetterSetter	static
getPickedProteinScores_(std::unordered_map< String, ScoreToTgtDecLabelPair > &picked_scores, const ProteinIdentification &id, const String &decoy_string, bool decoy_prefix)	IDScoreGetterSetter	static
getScores_(ScoreToTgtDecLabelPairs &scores_labels, const std::vector< ProteinIdentification::ProteinGroup > &grps, const std::unordered_set< std::string > &decoy_accs)	IDScoreGetterSetter	static
getScores_(ScoreToTgtDecLabelPairs &scores_labels, const std::vector< PeptideIdentification > &ids, Args &&... args)	IDScoreGetterSetter	inlinestatic
getScores_(ScoreToTgtDecLabelPairs &scores_labels, const ProteinIdentification &id)	IDScoreGetterSetter	inlinestatic
getScores_(ScoreToTgtDecLabelPairs &scores_labels, const PeptideIdentification &id, bool all_hits, Args &&... args)	IDScoreGetterSetter	inlinestatic
getScores_(ScoreToTgtDecLabelPairs &scores_labels, const PeptideIdentification &id, IDPredicate &&fun, bool all_hits, Args &&... args)	IDScoreGetterSetter	inlinestatic
getScores_(ScoreToTgtDecLabelPairs &scores_labels, const PeptideHit &hit, HitPredicate &&fun)	IDScoreGetterSetter	inlinestatic
getScores_(ScoreToTgtDecLabelPairs &scores_labels, const HitType &hit)	IDScoreGetterSetter	inlinestatic
getTDLabel_(const MetaInfoInterface &idOrHit)	IDScoreGetterSetter	inlinestatic
removeDecoyStringIfPresent_(const String &acc, const String &decoy_string, bool decoy_prefix)	IDScoreGetterSetter	static
setPeptideScoresForMap_(const std::map< double, double > &scores_to_FDR, ConsensusMap &cmap, bool include_unassigned_peptides, const std::string &score_type, bool higher_better, bool keep_decoy, Args &&... args)	IDScoreGetterSetter	inlinestatic
setPeptideScoresFromMap_(std::unordered_map< String, ScoreToTgtDecLabelPair > const &seq_to_fdr, std::vector< PeptideIdentification > &ids, std::string const &score_type, bool keep_decoys)	IDScoreGetterSetter	static
setPeptideScoresFromMap_(std::unordered_map< String, ScoreToTgtDecLabelPair > const &seq_to_fdr, ConsensusMap &map, std::string const &score_type, bool keep_decoys, bool include_unassigned)	IDScoreGetterSetter	static
setScore_(const std::map< double, double > &scores_to_FDR, HitType &hit, const std::string &old_score_type)	IDScoreGetterSetter	inlinestatic
setScoreAndMoveIfTarget_(const std::map< double, double > &scores_to_FDR, HitType &hit, const std::string &old_score_type, std::vector< HitType > &new_hits)	IDScoreGetterSetter	inlinestatic
setScoreAndMoveIfTarget_(const std::map< double, double > &scores_to_FDR, PeptideHit &hit, const std::string &old_score_type, std::vector< PeptideHit > &new_hits, int charge)	IDScoreGetterSetter	inlinestatic
setScoreHigherWorse_(const std::map< double, double > &scores_to_FDR, HitType &hit, const std::string &old_score_type)	IDScoreGetterSetter	inlinestatic
setScoreHigherWorseAndMoveIfTarget_(const std::map< double, double > &scores_to_FDR, HitType &hit, const std::string &old_score_type, std::vector< HitType > &new_hits)	IDScoreGetterSetter	inlinestatic
setScores_(const std::map< double, double > &scores_to_FDR, std::vector< IDType > &ids, const std::string &score_type, bool higher_better, Args &&... args)	IDScoreGetterSetter	inlinestatic
setScores_(const std::map< double, double > &scores_to_FDR, IDType &id, const std::string &score_type, bool higher_better, bool keep_decoy)	IDScoreGetterSetter	inlinestatic
setScores_(const std::map< double, double > &scores_to_FDR, IDType &id, const String &old_score_type)	IDScoreGetterSetter	inlinestatic
setScores_(const std::map< double, double > &scores_to_FDR, PeptideIdentification &id, const std::string &score_type, bool higher_better, bool keep_decoy, int charge)	IDScoreGetterSetter	inlinestatic
setScores_(const std::map< double, double > &scores_to_FDR, PeptideIdentification &id, const std::string &score_type, bool higher_better, bool keep_decoy, int charge, const String &identifier)	IDScoreGetterSetter	inlinestatic
setScores_(const std::map< double, double > &scores_to_FDR, IDType &id, const std::string &score_type, bool higher_better, bool keep_decoy, const String &identifier)	IDScoreGetterSetter	inlinestatic
setScores_(const std::map< double, double > &scores_to_FDR, PeptideIdentification &id, const std::string &score_type, bool higher_better, int charge, const String &identifier)	IDScoreGetterSetter	inlinestatic
setScores_(const std::map< double, double > &scores_to_FDR, IDType &id, const std::string &score_type, bool higher_better, const String &identifier)	IDScoreGetterSetter	inlinestatic
setScores_(const std::map< double, double > &scores_to_FDR, IDType &id, const std::string &score_type, bool higher_better, int charge)	IDScoreGetterSetter	inlinestatic
setScores_(const std::map< double, double > &scores_to_FDR, std::vector< ProteinIdentification::ProteinGroup > &grps, const std::string &score_type, bool higher_better)	IDScoreGetterSetter	static
setScoresAndRemoveDecoys_(const std::map< double, double > &scores_to_FDR, IDType &id, const String &old_score_type, Args &&... args)	IDScoreGetterSetter	inlinestatic
setScoresHigherWorse_(const std::map< double, double > &scores_to_FDR, IDType &id, const String &old_score_type)	IDScoreGetterSetter	inlinestatic
setScoresHigherWorseAndRemoveDecoys_(const std::map< double, double > &scores_to_FDR, IDType &id, const String &old_score_type, Args &&... args)	IDScoreGetterSetter	inlinestatic
setScoreType_(IDType &id, const std::string &score_type, bool higher_better)	IDScoreGetterSetter	inlinestatic