 |
OpenMS
|
This is the complete list of members for TraMLHandler, including all inherited members.
| ActionMode enum name | XMLHandler | |
| actual_compound_ | TraMLHandler | protected |
| actual_configuration_ | TraMLHandler | protected |
| actual_contact_ | TraMLHandler | protected |
| actual_instrument_ | TraMLHandler | protected |
| actual_intermediate_products_ | TraMLHandler | protected |
| actual_interpretation_ | TraMLHandler | protected |
| actual_peptide_ | TraMLHandler | protected |
| actual_prediction_ | TraMLHandler | protected |
| actual_product_ | TraMLHandler | protected |
| actual_protein_ | TraMLHandler | protected |
| actual_publication_ | TraMLHandler | protected |
| actual_rt_ | TraMLHandler | protected |
| actual_software_ | TraMLHandler | protected |
| actual_sourcefile_ | TraMLHandler | protected |
| actual_target_ | TraMLHandler | protected |
| actual_transition_ | TraMLHandler | protected |
| actual_validation_ | TraMLHandler | protected |
| asBool_(const String &in) const | XMLHandler | inlineprotected |
| asDateTime_(String date_string) const | XMLHandler | inlineprotected |
| asDouble_(const String &in) const | XMLHandler | inlineprotected |
| asFloat_(const String &in) const | XMLHandler | inlineprotected |
| asInt_(const String &in) const | XMLHandler | inlineprotected |
| asInt_(const XMLCh *in) const | XMLHandler | inlineprotected |
| asUInt_(const String &in) const | XMLHandler | inlineprotected |
| attributeAsDouble_(const xercesc::Attributes &a, const char *name) const | XMLHandler | inlineprotected |
| attributeAsDouble_(const xercesc::Attributes &a, const XMLCh *name) const | XMLHandler | inlineprotected |
| attributeAsDoubleList_(const xercesc::Attributes &a, const char *name) const | XMLHandler | inlineprotected |
| attributeAsDoubleList_(const xercesc::Attributes &a, const XMLCh *name) const | XMLHandler | inlineprotected |
| attributeAsInt_(const xercesc::Attributes &a, const char *name) const | XMLHandler | inlineprotected |
| attributeAsInt_(const xercesc::Attributes &a, const XMLCh *name) const | XMLHandler | inlineprotected |
| attributeAsIntList_(const xercesc::Attributes &a, const char *name) const | XMLHandler | inlineprotected |
| attributeAsIntList_(const xercesc::Attributes &a, const XMLCh *name) const | XMLHandler | inlineprotected |
| attributeAsString_(const xercesc::Attributes &a, const char *name) const | XMLHandler | inlineprotected |
| attributeAsString_(const xercesc::Attributes &a, const XMLCh *name) const | XMLHandler | inlineprotected |
| attributeAsStringList_(const xercesc::Attributes &a, const char *name) const | XMLHandler | inlineprotected |
| attributeAsStringList_(const xercesc::Attributes &a, const XMLCh *name) const | XMLHandler | inlineprotected |
| cexp_ | TraMLHandler | protected |
| characters(const XMLCh *const chars, const XMLSize_t length) override | TraMLHandler | |
| checkUniqueIdentifiers_(const std::vector< ProteinIdentification > &prot_ids) const | XMLHandler | |
| ConfigurationListType typedef | TraMLHandler | |
| cv_ | TraMLHandler | protected |
| cv_terms_ | XMLHandler | protected |
| cvStringToEnum_(const Size section, const String &term, const char *message, const SignedSize result_on_error=0) | XMLHandler | protected |
| endElement(const XMLCh *const, const XMLCh *const, const XMLCh *const qname) override | TraMLHandler | |
| equal_(const XMLCh *a, const XMLCh *b) const | XMLHandler | inlineprotected |
| error(const xercesc::SAXParseException &exception) override | XMLHandler | |
| error(ActionMode mode, const String &msg, UInt line=0, UInt column=0) const | XMLHandler | |
| exp_ | TraMLHandler | protected |
| expectList_(const String &str) const | XMLHandler | inlineprivate |
| fatalError(const xercesc::SAXParseException &exception) override | XMLHandler | |
| fatalError(ActionMode mode, const String &msg, UInt line=0, UInt column=0) const | XMLHandler | |
| file_ | XMLHandler | protected |
| fromXSDString(const String &type, const String &value) | XMLHandler | inlinestatic |
| getChildWithName_(const String &parent_accession, const String &name) const | TraMLHandler | protected |
| getLoadDetail() const | XMLHandler | virtual |
| handleCVParam_(const String &parent_parent_tag, const String &parent_tag, const CVTerm &cv_term) | TraMLHandler | protected |
| handleUserParam_(const String &parent_parent_tag, const String &parent_tag, const String &name, const String &type, const String &value) | TraMLHandler | protected |
| LD_ALLDATA enum value | XMLHandler | |
| LD_COUNTS_WITHOPTIONS enum value | XMLHandler | |
| LD_RAWCOUNTS enum value | XMLHandler | |
| LOAD enum value | XMLHandler | |
| load_detail_ | XMLHandler | protected |
| LOADDETAIL enum name | XMLHandler | |
| logger_ | TraMLHandler | protected |
| open_tags_ | XMLHandler | protected |
| operator=(const TraMLHandler &rhs)=delete | TraMLHandler | |
| optionalAttributeAsDouble_(double &value, const xercesc::Attributes &a, const char *name) const | XMLHandler | inlineprotected |
| optionalAttributeAsDouble_(double &value, const xercesc::Attributes &a, const XMLCh *name) const | XMLHandler | inlineprotected |
| optionalAttributeAsDoubleList_(DoubleList &value, const xercesc::Attributes &a, const char *name) const | XMLHandler | inlineprotected |
| optionalAttributeAsDoubleList_(DoubleList &value, const xercesc::Attributes &a, const XMLCh *name) const | XMLHandler | inlineprotected |
| optionalAttributeAsInt_(Int &value, const xercesc::Attributes &a, const char *name) const | XMLHandler | inlineprotected |
| optionalAttributeAsInt_(Int &value, const xercesc::Attributes &a, const XMLCh *name) const | XMLHandler | inlineprotected |
| optionalAttributeAsIntList_(IntList &value, const xercesc::Attributes &a, const char *name) const | XMLHandler | inlineprotected |
| optionalAttributeAsIntList_(IntList &value, const xercesc::Attributes &a, const XMLCh *name) const | XMLHandler | inlineprotected |
| optionalAttributeAsString_(String &value, const xercesc::Attributes &a, const char *name) const | XMLHandler | inlineprotected |
| optionalAttributeAsString_(String &value, const xercesc::Attributes &a, const XMLCh *name) const | XMLHandler | inlineprotected |
| optionalAttributeAsStringList_(StringList &value, const xercesc::Attributes &a, const char *name) const | XMLHandler | inlineprotected |
| optionalAttributeAsStringList_(StringList &value, const xercesc::Attributes &a, const XMLCh *name) const | XMLHandler | inlineprotected |
| optionalAttributeAsUInt_(UInt &value, const xercesc::Attributes &a, const char *name) const | XMLHandler | inlineprotected |
| optionalAttributeAsUInt_(UInt &value, const xercesc::Attributes &a, const XMLCh *name) const | XMLHandler | inlineprotected |
| ProductListType typedef | TraMLHandler | |
| reset() | XMLHandler | |
| setLoadDetail(const LOADDETAIL d) | XMLHandler | virtual |
| sm_ | XMLHandler | protected |
| startElement(const XMLCh *const, const XMLCh *const, const XMLCh *const qname, const xercesc::Attributes &attributes) override | TraMLHandler | |
| STORE enum value | XMLHandler | |
| tag_ | TraMLHandler | protected |
| TraMLHandler()=delete | TraMLHandler | |
| TraMLHandler(const TraMLHandler &rhs)=delete | TraMLHandler | |
| TraMLHandler(const TargetedExperiment &exp, const String &filename, const String &version, const ProgressLogger &logger) | TraMLHandler | |
| TraMLHandler(TargetedExperiment &exp, const String &filename, const String &version, const ProgressLogger &logger) | TraMLHandler | |
| version_ | XMLHandler | protected |
| warning(const xercesc::SAXParseException &exception) override | XMLHandler | |
| warning(ActionMode mode, const String &msg, UInt line=0, UInt column=0) const | XMLHandler | |
| writeConfiguration_(std::ostream &os, const std::vector< ReactionMonitoringTransition::Configuration >::const_iterator &cit) const | TraMLHandler | protected |
| writeCVList_(std::ostream &os, const std::map< String, std::vector< CVTerm >> &cv_terms, UInt indent) const | TraMLHandler | protected |
| writeCVParams_(std::ostream &os, const CVTermList &cv_terms, UInt indent) const | TraMLHandler | protected |
| writeCVParams_(std::ostream &os, const CVTermListInterface &cv_terms, UInt indent) const | TraMLHandler | protected |
| writeProduct_(std::ostream &os, const std::vector< ReactionMonitoringTransition::Product >::const_iterator &prod_it) const | TraMLHandler | protected |
| writeRetentionTime_(std::ostream &os, const TargetedExperimentHelper::RetentionTime &rt) const | TraMLHandler | protected |
| writeTarget_(std::ostream &os, const std::vector< IncludeExcludeTarget >::const_iterator &it) const | TraMLHandler | protected |
| writeTo(std::ostream &os) override | TraMLHandler | virtual |
| writeUserParam_(std::ostream &os, const MetaInfoInterface &meta, UInt indent) const | TraMLHandler | protected |
| OpenMS::Internal::XMLHandler::writeUserParam_(const String &tag_name, std::ostream &os, const MetaInfoInterface &meta, UInt indent) const | XMLHandler | protected |
| writeUserParams_(std::ostream &os, const std::vector< MetaInfoInterface > &meta, UInt indent) const | TraMLHandler | protected |
| writeXMLEscape(const String &to_escape) | XMLHandler | inlinestatic |
| XMLHandler(const String &filename, const String &version) | XMLHandler | |
| XMLHandler() | XMLHandler | private |
| ~TraMLHandler() override | TraMLHandler | |
| ~XMLHandler() override | XMLHandler |
1.9.1 
