MascotInfile Member List

This is the complete list of members for MascotInfile, including all inherited members.

boundary_	MascotInfile	protected
charges_	MascotInfile	protected
cleavage_	MascotInfile	protected
CMD enum value	ProgressLogger
current_logger_	ProgressLogger	mutableprotected
db_	MascotInfile	protected
endProgress(UInt64 bytes_processed=0) const	ProgressLogger
form_version_	MascotInfile	protected
getBoundary()	MascotInfile
getCharges()	MascotInfile
getCleavage()	MascotInfile
getDB()	MascotInfile
getFormVersion()	MascotInfile
getHits()	MascotInfile
getInstrument()	MascotInfile
getLogType() const	ProgressLogger
getMassType()	MascotInfile
getMissedCleavages() const	MascotInfile
getModifications()	MascotInfile
getNextSpectrum_(std::istream &is, std::vector< std::pair< double, double > > &spectrum, UInt &charge, double &precursor_mz, double &precursor_int, double &rt, String &title)	MascotInfile	protected
getPeakMassTolerance() const	MascotInfile
getPrecursorMassTolerance() const	MascotInfile
getSearchType()	MascotInfile
getTaxonomy()	MascotInfile
getVariableModifications()	MascotInfile
GUI enum value	ProgressLogger
hits_	MascotInfile	protected
instrument_	MascotInfile	protected
ion_mass_tolerance_	MascotInfile	protected
last_invoke_	ProgressLogger	mutableprotected
load(const String &filename, MapType &exp)	MascotInfile	inline
LogType enum name	ProgressLogger
logTypeToFactoryName_(LogType type)	ProgressLogger	protectedstatic
MascotInfile()	MascotInfile
mass_type_	MascotInfile	protected
missed_cleavages_	MascotInfile	protected
mods_	MascotInfile	protected
mz_	MascotInfile	protected
nextProgress() const	ProgressLogger
NONE enum value	ProgressLogger
operator=(const ProgressLogger &other)	ProgressLogger
precursor_mass_tolerance_	MascotInfile	protected
ProgressLogger()	ProgressLogger
ProgressLogger(const ProgressLogger &other)	ProgressLogger
recursion_depth_	ProgressLogger	protectedstatic
retention_time_	MascotInfile	protected
search_title_	MascotInfile	protected
search_type_	MascotInfile	protected
setBoundary(const String &boundary)	MascotInfile
setCharges(std::vector< Int > &charges)	MascotInfile
setCleavage(const String &cleavage)	MascotInfile
setDB(const String &db)	MascotInfile
setFormVersion(const String &form_version)	MascotInfile
setHits(const String &hits)	MascotInfile
setInstrument(const String &instrument)	MascotInfile
setLogType(LogType type) const	ProgressLogger
setMassType(const String &mass_type)	MascotInfile
setMissedCleavages(UInt missed_cleavages)	MascotInfile
setModifications(const std::vector< String > &mods)	MascotInfile
setPeakMassTolerance(float ion_mass_tolerance)	MascotInfile
setPrecursorMassTolerance(float precursor_mass_tolerance)	MascotInfile
setProgress(SignedSize value) const	ProgressLogger
setSearchType(const String &search_type)	MascotInfile
setTaxonomy(const String &taxonomy)	MascotInfile
setVariableModifications(const std::vector< String > &mods)	MascotInfile
startProgress(SignedSize begin, SignedSize end, const String &label) const	ProgressLogger
store(const String &filename, const PeakSpectrum &spec, double mz, double retention_time, String search_title)	MascotInfile
store(const String &filename, const PeakMap &experiment, String search_title)	MascotInfile
taxonomy_	MascotInfile	protected
type_	ProgressLogger	mutableprotected
variable_mods_	MascotInfile	protected
writeHeader_(FILE *fp)	MascotInfile	protected
writeMSExperiment_(FILE *fp, const String &filename, const PeakMap &experiment)	MascotInfile	protected
writeParameterHeader_(const String &name, FILE *fp, bool line_break=true)	MascotInfile	protected
writeSpectrum_(FILE *fp, const String &filename, const PeakSpectrum &peaks)	MascotInfile	protected
~MascotInfile() override	MascotInfile
~ProgressLogger()	ProgressLogger	virtual