OpenMS
MzDataHandler Member List

This is the complete list of members for MzDataHandler, including all inherited members.

ActionMode enum nameXMLHandler
asBool_(const String &in) constXMLHandlerinlineprotected
asDateTime_(String date_string) constXMLHandlerinlineprotected
asDouble_(const String &in) constXMLHandlerinlineprotected
asFloat_(const String &in) constXMLHandlerinlineprotected
asInt_(const String &in) constXMLHandlerinlineprotected
asInt_(const XMLCh *in) constXMLHandlerinlineprotected
asUInt_(const String &in) constXMLHandlerinlineprotected
attributeAsDouble_(const xercesc::Attributes &a, const char *name) constXMLHandlerinlineprotected
attributeAsDouble_(const xercesc::Attributes &a, const XMLCh *name) constXMLHandlerinlineprotected
attributeAsDoubleList_(const xercesc::Attributes &a, const char *name) constXMLHandlerinlineprotected
attributeAsDoubleList_(const xercesc::Attributes &a, const XMLCh *name) constXMLHandlerinlineprotected
attributeAsInt_(const xercesc::Attributes &a, const char *name) constXMLHandlerinlineprotected
attributeAsInt_(const xercesc::Attributes &a, const XMLCh *name) constXMLHandlerinlineprotected
attributeAsIntList_(const xercesc::Attributes &a, const char *name) constXMLHandlerinlineprotected
attributeAsIntList_(const xercesc::Attributes &a, const XMLCh *name) constXMLHandlerinlineprotected
attributeAsString_(const xercesc::Attributes &a, const char *name) constXMLHandlerinlineprotected
attributeAsString_(const xercesc::Attributes &a, const XMLCh *name) constXMLHandlerinlineprotected
attributeAsStringList_(const xercesc::Attributes &a, const char *name) constXMLHandlerinlineprotected
attributeAsStringList_(const xercesc::Attributes &a, const XMLCh *name) constXMLHandlerinlineprotected
cexp_MzDataHandlerprotected
characters(const XMLCh *const chars, const XMLSize_t length) overrideMzDataHandler
checkUniqueIdentifiers_(const std::vector< ProteinIdentification > &prot_ids) constXMLHandler
cv_terms_XMLHandlerprotected
cvParam_(const String &name, const String &value)MzDataHandlerprotected
cvParamToValue(const ControlledVocabulary &cv, const String &parent_tag, const String &accession, const String &name, const String &value, const String &unit_accession) constXMLHandler
cvParamToValue(const ControlledVocabulary &cv, const CVTerm &raw_term) constXMLHandler
cvStringToEnum_(const Size section, const String &term, const char *message, const SignedSize result_on_error=0)XMLHandlerprotected
data_processing_MzDataHandlerprotected
data_to_decode_MzDataHandlerprotected
data_to_encode_MzDataHandlerprotected
decoded_double_list_MzDataHandlerprotected
decoded_list_MzDataHandlerprotected
endElement(const XMLCh *const, const XMLCh *const, const XMLCh *const qname) overrideMzDataHandler
endians_MzDataHandlerprotected
equal_(const XMLCh *a, const XMLCh *b) constXMLHandlerinlineprotected
error(const xercesc::SAXParseException &exception) overrideXMLHandler
error(ActionMode mode, const String &msg, UInt line=0, UInt column=0) constXMLHandler
exp_MzDataHandlerprotected
expectList_(const String &str) constXMLHandlerinlineprivate
fatalError(const xercesc::SAXParseException &exception) overrideXMLHandler
fatalError(ActionMode mode, const String &msg, UInt line=0, UInt column=0) constXMLHandler
file_XMLHandlerprotected
fillData_()MzDataHandlerprotected
fromXSDString(const String &type, const String &value)XMLHandlerinlinestatic
getLoadDetail() constXMLHandlervirtual
init_()MzDataHandlerprivate
LD_ALLDATA enum valueXMLHandler
LD_COUNTS_WITHOPTIONS enum valueXMLHandler
LD_RAWCOUNTS enum valueXMLHandler
LOAD enum valueXMLHandler
load_detail_XMLHandlerprotected
LOADDETAIL enum nameXMLHandler
logger_MzDataHandlerprotected
meta_id_descs_MzDataHandlerprotected
MzDataHandler(MapType &exp, const String &filename, const String &version, ProgressLogger &logger)MzDataHandler
MzDataHandler(const MapType &exp, const String &filename, const String &version, const ProgressLogger &logger)MzDataHandler
open_tags_XMLHandlerprotected
optionalAttributeAsDouble_(double &value, const xercesc::Attributes &a, const char *name) constXMLHandlerinlineprotected
optionalAttributeAsDouble_(double &value, const xercesc::Attributes &a, const XMLCh *name) constXMLHandlerinlineprotected
optionalAttributeAsDoubleList_(DoubleList &value, const xercesc::Attributes &a, const char *name) constXMLHandlerinlineprotected
optionalAttributeAsDoubleList_(DoubleList &value, const xercesc::Attributes &a, const XMLCh *name) constXMLHandlerinlineprotected
optionalAttributeAsInt_(Int &value, const xercesc::Attributes &a, const char *name) constXMLHandlerinlineprotected
optionalAttributeAsInt_(Int &value, const xercesc::Attributes &a, const XMLCh *name) constXMLHandlerinlineprotected
optionalAttributeAsIntList_(IntList &value, const xercesc::Attributes &a, const char *name) constXMLHandlerinlineprotected
optionalAttributeAsIntList_(IntList &value, const xercesc::Attributes &a, const XMLCh *name) constXMLHandlerinlineprotected
optionalAttributeAsString_(String &value, const xercesc::Attributes &a, const char *name) constXMLHandlerinlineprotected
optionalAttributeAsString_(String &value, const xercesc::Attributes &a, const XMLCh *name) constXMLHandlerinlineprotected
optionalAttributeAsStringList_(StringList &value, const xercesc::Attributes &a, const char *name) constXMLHandlerinlineprotected
optionalAttributeAsStringList_(StringList &value, const xercesc::Attributes &a, const XMLCh *name) constXMLHandlerinlineprotected
optionalAttributeAsUInt_(UInt &value, const xercesc::Attributes &a, const char *name) constXMLHandlerinlineprotected
optionalAttributeAsUInt_(UInt &value, const xercesc::Attributes &a, const XMLCh *name) constXMLHandlerinlineprotected
options_MzDataHandlerprotected
peak_count_MzDataHandlerprotected
PeakType typedefMzDataHandlerprotected
precisions_MzDataHandlerprotected
reset()XMLHandler
setLoadDetail(const LOADDETAIL d)XMLHandlervirtual
setOptions(const PeakFileOptions &options)MzDataHandlerinline
skip_spectrum_MzDataHandlerprotected
sm_XMLHandlerprotected
spec_MzDataHandlerprotected
SpectrumType typedefMzDataHandlerprotected
startElement(const XMLCh *const, const XMLCh *const, const XMLCh *const qname, const xercesc::Attributes &attributes) overrideMzDataHandler
STORE enum valueXMLHandler
version_XMLHandlerprotected
warning(const xercesc::SAXParseException &exception) overrideXMLHandler
warning(ActionMode mode, const String &msg, UInt line=0, UInt column=0) constXMLHandler
writeBinary_(std::ostream &os, Size size, const String &tag, const String &name="", SignedSize id=-1)MzDataHandlerinlineprotected
writeCVS_(std::ostream &os, double value, const String &acc, const String &name, UInt indent=4) constMzDataHandlerinlineprotected
writeCVS_(std::ostream &os, const String &value, const String &acc, const String &name, UInt indent=4) constMzDataHandlerinlineprotected
writeCVS_(std::ostream &os, UInt value, UInt map, const String &acc, const String &name, UInt indent=4)MzDataHandlerinlineprotected
writeTo(std::ostream &os) overrideMzDataHandlervirtual
writeUserParam_(std::ostream &os, const MetaInfoInterface &meta, UInt indent=4)MzDataHandlerinlineprotected
OpenMS::Internal::XMLHandler::writeUserParam_(const String &tag_name, std::ostream &os, const MetaInfoInterface &meta, UInt indent) constXMLHandlerprotected
writeXMLEscape(const String &to_escape)XMLHandlerinlinestatic
XMLHandler(const String &filename, const String &version)XMLHandler
XMLHandler()XMLHandlerprivate
~MzDataHandler() overrideMzDataHandlerinline
~XMLHandler() overrideXMLHandler