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SiriusMSFile Member List

This is the complete list of members for SiriusMSFile, including all inherited members.

extractPrecursorIsotopePattern_(const double &precursor_mz, const MSSpectrum &precursor_spectrum, int &iterations, const int &charge)SiriusMSFileprotectedstatic
getHighestIntensityPeakInMZRange_(double test_mz, const MSSpectrum &spectrum, double tolerance, bool ppm)SiriusMSFileprotectedstatic
saveFeatureCompoundInfoAsTSV(const std::vector< SiriusMSFile::CompoundInfo > &v_cmpinfo, const std::string &filename)SiriusMSFilestatic
store(const MSExperiment &spectra, std::ofstream &os, const FeatureMapping::FeatureToMs2Indices &feature_mapping, const bool &feature_only, const int &isotope_pattern_iterations, const bool no_masstrace_info_isotope_pattern, std::vector< SiriusMSFile::CompoundInfo > &v_cmpinfo, const size_t &file_index)SiriusMSFilestatic
writeMsFile_(std::ofstream &os, const MSExperiment &spectra, const std::vector< size_t > &ms2_spectra_index, const SiriusMSFile::AccessionInfo &ainfo, const StringList &adducts, const std::vector< String > &v_description, const std::vector< String > &v_sumformula, const std::vector< std::pair< double, double >> &f_isotopes, int &feature_charge, uint64_t &feature_id, const double &feature_rt, const double &feature_mz, bool &writecompound, const bool &no_masstrace_info_isotope_pattern, const int &isotope_pattern_iterations, int &count_skipped_spectra, int &count_assume_mono, int &count_no_ms1, std::vector< SiriusMSFile::CompoundInfo > &v_cmpinfo, const size_t &file_index)SiriusMSFileprotectedstatic