KDTree.h

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// Copyright (c) 2002-present, OpenMS Inc. -- EKU Tuebingen, ETH Zurich, and FU Berlin
// SPDX-License-Identifier: BSD-3-Clause
//
// --------------------------------------------------------------------------
// $Maintainer: Johannes Veit $
// $Authors: Johannes Veit $
// --------------------------------------------------------------------------
 
/* Note: This file contains a concatenation of the 6 header files comprising
 *       libkdtree++ (node.hpp, function.hpp, allocator.hpp, iterator.hpp,
 *       region.hpp, kdtree.hpp).
 *
 *       Johannes Veit (2016)
 */
 
/* COPYRIGHT --
 *
 * This file is part of libkdtree++, a C++ template KD-Tree sorting container.
 * libkdtree++ is (c) 2004-2007 Martin F. Krafft <libkdtree@pobox.madduck.net>
 * and Sylvain Bougerel <sylvain.bougerel.devel@gmail.com> distributed under the
 * terms of the Artistic License 2.0. See the ./COPYING file in the source tree
 * root for more information.
 *
 * THIS PACKAGE IS PROVIDED "AS IS" AND WITHOUT ANY EXPRESS OR IMPLIED
 * WARRANTIES, INCLUDING, WITHOUT LIMITATION, THE IMPLIED WARRANTIES
 * OF MERCHANTABILITY AND FITNESS FOR A PARTICULAR PURPOSE.
 */
 
#ifndef OPENMS_DATASTRUCTURES_KDTREE_H
#define OPENMS_DATASTRUCTURES_KDTREE_H
 
#ifdef KDTREE_DEFINE_OSTREAM_OPERATORS
#  include <ostream>
#endif
 
#include <cstddef>
#include <cmath>
 
namespace KDTree
{
struct _Node_base
{
  typedef _Node_base* _Base_ptr;
  typedef _Node_base const* _Base_const_ptr;
 
  _Base_ptr _M_parent;
  _Base_ptr _M_left;
  _Base_ptr _M_right;
 
  _Node_base(_Base_ptr const __PARENT = nullptr,
             _Base_ptr const __LEFT = nullptr,
             _Base_ptr const __RIGHT = nullptr)
    : _M_parent(__PARENT), _M_left(__LEFT), _M_right(__RIGHT) {}
 
  static _Base_ptr
  _S_minimum(_Base_ptr __x)
  {
    while (__x->_M_left) __x = __x->_M_left;
    return __x;
  }
 
  static _Base_ptr
  _S_maximum(_Base_ptr __x)
  {
    while (__x->_M_right) __x = __x->_M_right;
    return __x;
  }
};
 
template <typename _Val>
struct _Node : public _Node_base
{
  using _Node_base::_Base_ptr;
  typedef _Node* _Link_type;
 
  _Val _M_value;
 
  _Node(_Val const& __VALUE = _Val(),
        _Base_ptr const __PARENT = nullptr,
        _Base_ptr const __LEFT = nullptr,
        _Base_ptr const __RIGHT = nullptr)
    : _Node_base(__PARENT, __LEFT, __RIGHT), _M_value(__VALUE) {}
 
#ifdef KDTREE_DEFINE_OSTREAM_OPERATORS
 
  template <typename Char, typename Traits>
  friend
  std::basic_ostream<Char, Traits>&
  operator<<(typename std::basic_ostream<Char, Traits>& out,
             _Node_base const& node)
  {
    out << &node;
    out << " parent: " << node._M_parent;
    out << "; left: " << node._M_left;
    out << "; right: " << node._M_right;
    return out;
  }
 
  template <typename Char, typename Traits>
  friend
  std::basic_ostream<Char, Traits>&
  operator<<(typename std::basic_ostream<Char, Traits>& out,
             _Node<_Val> const& node)
  {
    out << &node;
    out << ' ' << node._M_value;
    out << "; parent: " << node._M_parent;
    out << "; left: " << node._M_left;
    out << "; right: " << node._M_right;
    return out;
  }
 
#endif
};
 
template <typename _Val, typename _Acc, typename _Cmp>
class _Node_compare
{
public:
  _Node_compare(size_t const __DIM, _Acc const& acc, _Cmp const& cmp)
    : _M_DIM(__DIM), _M_acc(acc), _M_cmp(cmp) {}
 
  bool
  operator()(_Val const& __A, _Val const& __B) const
  {
    return _M_cmp(_M_acc(__A, _M_DIM), _M_acc(__B, _M_DIM));
  }
 
private:
  size_t _M_DIM;  // don't make this const so that an assignment operator can be auto-generated
  _Acc _M_acc;
  _Cmp _M_cmp;
};
 
template <typename _ValA, typename _ValB, typename _Cmp,
          typename _Acc>
inline
bool
_S_node_compare (const size_t __dim,
                 const _Cmp& __cmp, const _Acc& __acc,
                 const _ValA& __a, const _ValB& __b)
{
  return __cmp(__acc(__a, __dim), __acc(__b, __dim));
}
 
template <typename _ValA, typename _ValB, typename _Dist,
          typename _Acc>
inline
typename _Dist::distance_type
_S_node_distance (const size_t __dim,
                  const _Dist& __dist, const _Acc& __acc,
                  const _ValA& __a, const _ValB& __b)
{
  return __dist(__acc(__a, __dim), __acc(__b, __dim));
}
 
template <typename _ValA, typename _ValB, typename _Dist,
          typename _Acc>
inline
typename _Dist::distance_type
_S_accumulate_node_distance (const size_t __dim,
                             const _Dist& __dist, const _Acc& __acc,
                             const _ValA& __a, const _ValB& __b)
{
  typename _Dist::distance_type d = 0;
  for (size_t i=0; i<__dim; ++i)
    d += __dist(__acc(__a, i), __acc(__b, i));
  return d;
}
 
template <typename _Val, typename _Cmp, typename _Acc, typename NodeType>
inline
const NodeType*
_S_node_descend (const size_t __dim,
                 const _Cmp& __cmp, const _Acc& __acc,
                 const _Val& __val, const NodeType* __node)
{
  if (_S_node_compare(__dim, __cmp, __acc, __val,  __node->_M_value))
    return static_cast<const NodeType *>(__node->_M_left);
  return static_cast<const NodeType *>(__node->_M_right);
}
 
template <class SearchVal,
          typename NodeType, typename _Cmp,
          typename _Acc, typename _Dist,
          typename _Predicate>
inline
std::pair<const NodeType*,
std::pair<size_t, typename _Dist::distance_type> >
_S_node_nearest (const size_t __k, size_t __dim, SearchVal const& __val,
                 const NodeType* __node, const _Node_base* __end,
                 const NodeType* __best, typename _Dist::distance_type __max,
                 const _Cmp& __cmp, const _Acc& __acc, const _Dist& __dist,
                 _Predicate __p)
{
  typedef const NodeType* NodePtr;
  NodePtr pcur = __node;
  NodePtr cur = _S_node_descend(__dim % __k, __cmp, __acc, __val, __node);
  size_t cur_dim = __dim+1;
  // find the smallest __max distance in direct descent
  while (cur)
  {
    if (__p(cur->_M_value))
    {
      typename _Dist::distance_type d = 0;
      for (size_t i=0; i != __k; ++i)
        d += _S_node_distance(i, __dist, __acc, __val, cur->_M_value);
      d = std::sqrt(d);
      if (d <= __max)
        // ("bad candidate notes")
        // Changed: removed this test: || ( d == __max && cur < __best ))
        // Can't do this optimisation without checking that the current 'best' is not the root AND is not a valid candidate...
        // This is because find_nearest() etc will call this function with the best set to _M_root EVEN IF _M_root is not a valid answer (eg too far away or doesn't pass the predicate test)
      {
        __best = cur;
        __max = d;
        __dim = cur_dim;
      }
    }
    pcur = cur;
    cur = _S_node_descend(cur_dim % __k, __cmp, __acc, __val, cur);
    ++cur_dim;
  }
  // Swap cur to prev, only prev is a valid node.
  cur = pcur;
  --cur_dim;
  pcur = NULL;
  // Probe all node's children not visited yet (siblings of the visited nodes).
  NodePtr probe = cur;
  NodePtr pprobe = probe;
  NodePtr near_node;
  NodePtr far_node;
  size_t probe_dim = cur_dim;
  if (_S_node_compare(probe_dim % __k, __cmp, __acc, __val, probe->_M_value))
    near_node = static_cast<NodePtr>(probe->_M_right);
  else
    near_node = static_cast<NodePtr>(probe->_M_left);
  if (near_node
      // only visit node's children if node's plane intersect hypersphere
      && (std::sqrt(_S_node_distance(probe_dim % __k, __dist, __acc, __val, probe->_M_value)) <= __max))
  {
    probe = near_node;
    ++probe_dim;
  }
  while (cur != __end)
  {
    while (probe != cur)
    {
      if (_S_node_compare(probe_dim % __k, __cmp, __acc, __val, probe->_M_value))
      {
        near_node = static_cast<NodePtr>(probe->_M_left);
        far_node = static_cast<NodePtr>(probe->_M_right);
      }
      else
      {
        near_node = static_cast<NodePtr>(probe->_M_right);
        far_node = static_cast<NodePtr>(probe->_M_left);
      }
      if (pprobe == probe->_M_parent) // going downward ...
      {
        if (__p(probe->_M_value))
        {
          typename _Dist::distance_type d = 0;
          for (size_t i=0; i < __k; ++i)
            d += _S_node_distance(i, __dist, __acc, __val, probe->_M_value);
          d = std::sqrt(d);
          if (d <= __max)  // CHANGED, see the above notes ("bad candidate notes")
          {
            __best = probe;
            __max = d;
            __dim = probe_dim;
          }
        }
        pprobe = probe;
        if (near_node)
        {
          probe = near_node;
          ++probe_dim;
        }
        else if (far_node &&
                 // only visit node's children if node's plane intersect hypersphere
                 std::sqrt(_S_node_distance(probe_dim % __k, __dist, __acc, __val, probe->_M_value)) <= __max)
        {
          probe = far_node;
          ++probe_dim;
        }
        else
        {
          probe = static_cast<NodePtr>(probe->_M_parent);
          --probe_dim;
        }
      }
      else // ... and going upward.
      {
        if (pprobe == near_node && far_node
            // only visit node's children if node's plane intersect hypersphere
            && std::sqrt(_S_node_distance(probe_dim % __k, __dist, __acc, __val, probe->_M_value)) <= __max)
        {
          pprobe = probe;
          probe = far_node;
          ++probe_dim;
        }
        else
        {
          pprobe = probe;
          probe = static_cast<NodePtr>(probe->_M_parent);
          --probe_dim;
        }
      }
    }
    pcur = cur;
    cur = static_cast<NodePtr>(cur->_M_parent);
    --cur_dim;
    pprobe = cur;
    probe = cur;
    probe_dim = cur_dim;
    if (cur != __end)
    {
      if (pcur == cur->_M_left)
        near_node = static_cast<NodePtr>(cur->_M_right);
      else
        near_node = static_cast<NodePtr>(cur->_M_left);
      if (near_node
          // only visit node's children if node's plane intersect hypersphere
          && (std::sqrt(_S_node_distance(cur_dim % __k, __dist, __acc, __val, cur->_M_value)) <= __max))
      {
        probe = near_node;
        ++probe_dim;
      }
    }
  }
  return std::pair<NodePtr,
      std::pair<size_t, typename _Dist::distance_type> >
      (__best, std::pair<size_t, typename _Dist::distance_type>
       (__dim, __max));
}
 
 
} // namespace KDTree
 
#endif // include guard
 
/* COPYRIGHT --
 *
 * This file is part of libkdtree++, a C++ template KD-Tree sorting container.
 * libkdtree++ is (c) 2004-2007 Martin F. Krafft <libkdtree@pobox.madduck.net>
 * and Sylvain Bougerel <sylvain.bougerel.devel@gmail.com> distributed under the
 * terms of the Artistic License 2.0. See the ./COPYING file in the source tree
 * root for more information.
 *
 * THIS PACKAGE IS PROVIDED "AS IS" AND WITHOUT ANY EXPRESS OR IMPLIED
 * WARRANTIES, INCLUDING, WITHOUT LIMITATION, THE IMPLIED WARRANTIES
 * OF MERCHANTABILITY AND FITNESS FOR A PARTICULAR PURPOSE.
 */
#ifndef INCLUDE_KDTREE_ACCESSOR_HPP
#define INCLUDE_KDTREE_ACCESSOR_HPP
 
#include <cstddef>
 
namespace KDTree
{
template <typename _Val>
struct _Bracket_accessor
{
  typedef typename _Val::value_type result_type;
 
  result_type
  operator()(_Val const& V, size_t const N) const
  {
    return V[N];
  }
};
 
template <typename _Tp>
struct always_true
{
  bool operator() (const _Tp& ) const { return true; }
};
 
template <typename _Tp, typename _Dist>
struct squared_difference
{
  typedef _Dist distance_type;
 
  distance_type
  operator() (const _Tp& __a, const _Tp& __b) const
  {
    distance_type d=__a - __b;
    return d*d;
  }
};
 
template <typename _Tp, typename _Dist>
struct squared_difference_counted
{
  typedef _Dist distance_type;
 
  squared_difference_counted()
    : _M_count(0)
  { }
 
  void reset ()
  { _M_count = 0; }
 
  long&
  count () const
  { return _M_count; }
 
  distance_type
  operator() (const _Tp& __a, const _Tp& __b) const
  {
    distance_type d=__a - __b;
    ++_M_count;
    return d*d;
  }
 
private:
  mutable long _M_count;
};
 
} // namespace KDTree
 
#endif // include guard
 
/* COPYRIGHT --
 *
 * This file is part of libkdtree++, a C++ template KD-Tree sorting container.
 * libkdtree++ is (c) 2004-2007 Martin F. Krafft <libkdtree@pobox.madduck.net>
 * and Sylvain Bougerel <sylvain.bougerel.devel@gmail.com> distributed under the
 * terms of the Artistic License 2.0. See the ./COPYING file in the source tree
 * root for more information.
 *
 * THIS PACKAGE IS PROVIDED "AS IS" AND WITHOUT ANY EXPRESS OR IMPLIED
 * WARRANTIES, INCLUDING, WITHOUT LIMITATION, THE IMPLIED WARRANTIES
 * OF MERCHANTABILITY AND FITNESS FOR A PARTICULAR PURPOSE.
 */
#ifndef INCLUDE_KDTREE_ALLOCATOR_HPP
#define INCLUDE_KDTREE_ALLOCATOR_HPP
 
#include <cstddef>
 
namespace KDTree
{
 
template <typename _Tp, typename _Alloc>
class _Alloc_base
{
public:
  typedef _Node<_Tp> _Node_;
  typedef typename _Node_::_Base_ptr _Base_ptr;
  typedef _Alloc allocator_type;
 
  _Alloc_base(allocator_type const& __A)
    : _M_node_allocator(__A) {}
 
  allocator_type
  get_allocator() const
  {
    return _M_node_allocator;
  }
 
 
  class NoLeakAlloc
  {
    _Alloc_base * base;
    _Node_ * new_node;
 
  public:
    NoLeakAlloc(_Alloc_base * b) : base(b), new_node(base->_M_allocate_node()) {}
 
    _Node_ * get() { return new_node; }
    void disconnect() { new_node = nullptr; }
 
    ~NoLeakAlloc() { if (new_node) base->_M_deallocate_node(new_node); }
  };
 
 
protected:
  allocator_type _M_node_allocator;
 
  _Node_*
  _M_allocate_node()
  {
    return _M_node_allocator.allocate(1);
  }
 
  void
  _M_deallocate_node(_Node_* const __P)
  {
    return _M_node_allocator.deallocate(__P, 1);
  }
 
  void
  _M_construct_node(_Node_* __p, _Tp const __V = _Tp(),
                    _Base_ptr const __PARENT = NULL,
                    _Base_ptr const __LEFT = NULL,
                    _Base_ptr const __RIGHT = NULL)
  {
    new (__p) _Node_(__V, __PARENT, __LEFT, __RIGHT);
  }
 
  void
  _M_destroy_node(_Node_* __p)
  {
    _M_node_allocator.destroy(__p);
  }
};
 
} // namespace KDTree
 
#endif // include guard
 
/* COPYRIGHT --
 *
 * This file is part of libkdtree++, a C++ template KD-Tree sorting container.
 * libkdtree++ is (c) 2004-2007 Martin F. Krafft <libkdtree@pobox.madduck.net>
 * and Sylvain Bougerel <sylvain.bougerel.devel@gmail.com> distributed under the
 * terms of the Artistic License 2.0. See the ./COPYING file in the source tree
 * root for more information.
 *
 * THIS PACKAGE IS PROVIDED "AS IS" AND WITHOUT ANY EXPRESS OR IMPLIED
 * WARRANTIES, INCLUDING, WITHOUT LIMITATION, THE IMPLIED WARRANTIES
 * OF MERCHANTABILITY AND FITNESS FOR A PARTICULAR PURPOSE.
 */
#ifndef INCLUDE_KDTREE_ITERATOR_HPP
#define INCLUDE_KDTREE_ITERATOR_HPP
 
#include <iterator>
 
namespace KDTree
{
template <typename _Val, typename _Ref, typename _Ptr>
class _Iterator;
 
template<typename _Val, typename _Ref, typename _Ptr>
inline bool
operator==(_Iterator<_Val, _Ref, _Ptr> const&,
           _Iterator<_Val, _Ref, _Ptr> const&);
 
template<typename _Val>
inline bool
operator==(_Iterator<_Val, const _Val&, const _Val*> const&,
           _Iterator<_Val, _Val&, _Val*> const&);
 
template<typename _Val>
inline bool
operator==(_Iterator<_Val, _Val&, _Val*> const&,
           _Iterator<_Val, const _Val&, const _Val*> const&);
 
template<typename _Val, typename _Ref, typename _Ptr>
inline bool
operator!=(_Iterator<_Val, _Ref, _Ptr> const&,
           _Iterator<_Val, _Ref, _Ptr> const&);
 
template<typename _Val>
inline bool
operator!=(_Iterator<_Val, const _Val&, const _Val*> const&,
           _Iterator<_Val, _Val&, _Val*> const&);
 
template<typename _Val>
inline bool
operator!=(_Iterator<_Val, _Val&, _Val*> const&,
           _Iterator<_Val, const _Val&, const _Val*> const&);
 
class _Base_iterator
{
protected:
  typedef _Node_base::_Base_const_ptr _Base_const_ptr;
  _Base_const_ptr _M_node;
 
  inline _Base_iterator(_Base_const_ptr const __N = nullptr)
    : _M_node(__N) {}
  inline _Base_iterator(_Base_iterator const& __THAT)
    : _M_node(__THAT._M_node) {}
 
  inline void
  _M_increment()
  {
    if (_M_node->_M_right)
    {
      _M_node = _M_node->_M_right;
      while (_M_node->_M_left) _M_node = _M_node->_M_left;
    }
    else
    {
      _Base_const_ptr __p = _M_node->_M_parent;
      while (__p && _M_node == __p->_M_right)
      {
        _M_node = __p;
        __p = _M_node->_M_parent;
      }
      if (__p) // (__p) provide undetermined behavior on end()++ rather
        // than a segfault, similar to standard iterator.
        _M_node = __p;
    }
  }
 
  inline void
  _M_decrement()
  {
    if (!_M_node->_M_parent) // clearly identify the header node
    {
      _M_node = _M_node->_M_right;
    }
    else if (_M_node->_M_left)
    {
      _Base_const_ptr x = _M_node->_M_left;
      while (x->_M_right) x = x->_M_right;
      _M_node = x;
    }
    else
    {
      _Base_const_ptr __p = _M_node->_M_parent;
      while (__p && _M_node == __p->_M_left) // see below
      {
        _M_node = __p;
        __p = _M_node->_M_parent;
      }
      if (__p) // (__p) provide undetermined behavior on rend()++ rather
        // than a segfault, similar to standard iterator.
        _M_node = __p;
    }
  }
 
  template <size_t const __K, typename _Val, typename _Acc,
            typename _Dist, typename _Cmp, typename _Alloc>
  friend class KDTree;
};
 
template <typename _Val, typename _Ref, typename _Ptr>
class _Iterator : protected _Base_iterator
{
public:
  typedef _Val value_type;
  typedef _Ref reference;
  typedef _Ptr pointer;
  typedef _Iterator<_Val, _Val&, _Val*> iterator;
  typedef _Iterator<_Val, _Val const&, _Val const*> const_iterator;
  typedef _Iterator<_Val, _Ref, _Ptr> _Self;
  typedef _Node<_Val> const* _Link_const_type;
  typedef std::bidirectional_iterator_tag iterator_category;
  typedef ptrdiff_t difference_type;
 
  inline _Iterator()
    : _Base_iterator() {}
  inline _Iterator(_Link_const_type const __N)
    : _Base_iterator(__N) {}
  inline _Iterator(iterator const& __THAT)
    : _Base_iterator(__THAT) {}
 
  _Link_const_type get_raw_node() const
  {
    return _Link_const_type(_M_node);
  }
 
  reference
  operator*() const
  {
    return _Link_const_type(_M_node)->_M_value;
  }
 
  pointer
  operator->() const
  {
    return &(operator*());
  }
 
  _Self
  operator++()
  {
    _M_increment();
    return *this;
  }
 
  _Self
  operator++(int)
  {
    _Self ret = *this;
    _M_increment();
    return ret;
  }
 
  _Self&
  operator--()
  {
    _M_decrement();
    return *this;
  }
 
  _Self
  operator--(int)
  {
    _Self ret = *this;
    _M_decrement();
    return ret;
  }
 
  friend bool
  operator== <>(_Iterator<_Val, _Ref, _Ptr> const&,
                _Iterator<_Val, _Ref, _Ptr> const&);
 
  friend bool
  operator== <>(_Iterator<_Val, const _Val&, const _Val*> const&,
                _Iterator<_Val, _Val&, _Val*> const&);
 
  friend bool
  operator== <>(_Iterator<_Val, _Val&, _Val*> const&,
                _Iterator<_Val, const _Val&, const _Val*> const&);
 
  friend bool
  operator!= <>(_Iterator<_Val, _Ref, _Ptr> const&,
                _Iterator<_Val, _Ref, _Ptr> const&);
 
  friend bool
  operator!= <>(_Iterator<_Val, const _Val&, const _Val*> const&,
                _Iterator<_Val, _Val&, _Val*> const&);
 
  friend bool
  operator!= <>(_Iterator<_Val, _Val&, _Val*> const&,
                _Iterator<_Val, const _Val&, const _Val*> const&);
};
 
template<typename _Val, typename _Ref, typename _Ptr>
bool
operator==(_Iterator<_Val, _Ref, _Ptr> const& __X,
           _Iterator<_Val, _Ref, _Ptr> const& __Y)
{ return __X._M_node == __Y._M_node; }
 
template<typename _Val>
bool
operator==(_Iterator<_Val, const _Val&, const _Val*> const& __X,
           _Iterator<_Val, _Val&, _Val*> const& __Y)
{ return __X._M_node == __Y._M_node; }
 
template<typename _Val>
bool
operator==(_Iterator<_Val, _Val&, _Val*> const& __X,
           _Iterator<_Val, const _Val&, const _Val*> const& __Y)
{ return __X._M_node == __Y._M_node; }
 
template<typename _Val, typename _Ref, typename _Ptr>
bool
operator!=(_Iterator<_Val, _Ref, _Ptr> const& __X,
           _Iterator<_Val, _Ref, _Ptr> const& __Y)
{ return __X._M_node != __Y._M_node; }
 
template<typename _Val>
bool
operator!=(_Iterator<_Val, const _Val&, const _Val*> const& __X,
           _Iterator<_Val, _Val&, _Val*> const& __Y)
{ return __X._M_node != __Y._M_node; }
 
template<typename _Val>
bool
operator!=(_Iterator<_Val, _Val&, _Val*> const& __X,
           _Iterator<_Val, const _Val&, const _Val*> const& __Y)
{ return __X._M_node != __Y._M_node; }
 
} // namespace KDTree
 
#endif // include guard
 
/* COPYRIGHT --
 *
 * This file is part of libkdtree++, a C++ template KD-Tree sorting container.
 * libkdtree++ is (c) 2004-2007 Martin F. Krafft <libkdtree@pobox.madduck.net>
 * and Sylvain Bougerel <sylvain.bougerel.devel@gmail.com> distributed under the
 * terms of the Artistic License 2.0. See the ./COPYING file in the source tree
 * root for more information.
 *
 * THIS PACKAGE IS PROVIDED "AS IS" AND WITHOUT ANY EXPRESS OR IMPLIED
 * WARRANTIES, INCLUDING, WITHOUT LIMITATION, THE IMPLIED WARRANTIES
 * OF MERCHANTABILITY AND FITNESS FOR A PARTICULAR PURPOSE.
 */
#ifndef INCLUDE_KDTREE_REGION_HPP
#define INCLUDE_KDTREE_REGION_HPP
 
#include <cstddef>
 
namespace KDTree
{
 
template <size_t const __K, typename _Val, typename _SubVal,
          typename _Acc, typename _Cmp>
struct _Region
{
  typedef _Val value_type;
  typedef _SubVal subvalue_type;
 
  // special typedef for checking against a fuzzy point (for find_nearest)
  // Note the region (first) component is not supposed to have an area, its
  // bounds should all be set to a specific point.
  typedef std::pair<_Region,_SubVal> _CenterPt;
 
  _Region(_Acc const& __acc=_Acc(), const _Cmp& __cmp=_Cmp())
    : _M_acc(__acc), _M_cmp(__cmp) {}
 
  template <typename Val>
  _Region(Val const& __V,
          _Acc const& __acc=_Acc(), const _Cmp& __cmp=_Cmp())
    : _M_acc(__acc), _M_cmp(__cmp)
  {
    for (size_t __i = 0; __i != __K; ++__i)
    {
      _M_low_bounds[__i] = _M_high_bounds[__i] = _M_acc(__V,__i);
    }
  }
 
  template <typename Val>
  _Region(Val const& __V, subvalue_type const& __R,
          _Acc const& __acc=_Acc(), const _Cmp& __cmp=_Cmp())
    : _M_acc(__acc), _M_cmp(__cmp)
  {
    for (size_t __i = 0; __i != __K; ++__i)
    {
      _M_low_bounds[__i] = _M_acc(__V,__i) - __R;
      _M_high_bounds[__i] = _M_acc(__V,__i) + __R;
    }
  }
 
  bool
  intersects_with(_CenterPt const& __THAT) const
  {
    for (size_t __i = 0; __i != __K; ++__i)
    {
      // does it fall outside the bounds?
      // ! low-tolerance <= x <= high+tolerance
      // ! (low-tol <= x and x <= high+tol)
      // !low-tol<=x or !x<=high+tol
      // low-tol>x or x>high+tol
      // x<low-tol or high+tol<x
      if (_M_cmp(__THAT.first._M_low_bounds[__i], _M_low_bounds[__i] - __THAT.second)
          || _M_cmp(_M_high_bounds[__i] + __THAT.second, __THAT.first._M_low_bounds[__i]))
        return false;
    }
    return true;
  }
 
  bool
  intersects_with(_Region const& __THAT) const
  {
    for (size_t __i = 0; __i != __K; ++__i)
    {
      if (_M_cmp(__THAT._M_high_bounds[__i], _M_low_bounds[__i])
          || _M_cmp(_M_high_bounds[__i], __THAT._M_low_bounds[__i]))
        return false;
    }
    return true;
  }
 
  bool
  encloses(value_type const& __V) const
  {
    for (size_t __i = 0; __i != __K; ++__i)
    {
      if (_M_cmp(_M_acc(__V, __i), _M_low_bounds[__i])
          || _M_cmp(_M_high_bounds[__i], _M_acc(__V, __i)))
        return false;
    }
    return true;
  }
 
  _Region&
  set_high_bound(value_type const& __V, size_t const __L)
  {
    _M_high_bounds[__L % __K] = _M_acc(__V, __L % __K);
    return *this;
  }
 
  _Region&
  set_low_bound(value_type const& __V, size_t const __L)
  {
    _M_low_bounds[__L % __K] = _M_acc(__V, __L % __K);
    return *this;
  }
 
  subvalue_type _M_low_bounds[__K], _M_high_bounds[__K];
  _Acc _M_acc;
  _Cmp _M_cmp;
};
 
} // namespace KDTree
 
#endif // include guard
 
/* COPYRIGHT --
 *
 * This file is part of libkdtree++, a C++ template KD-Tree sorting container.
 * libkdtree++ is (c) 2004-2007 Martin F. Krafft <libkdtree@pobox.madduck.net>
 * and Sylvain Bougerel <sylvain.bougerel.devel@gmail.com> distributed under the
 * terms of the Artistic License 2.0. See the ./COPYING file in the source tree
 * root for more information.
 *
 * THIS PACKAGE IS PROVIDED "AS IS" AND WITHOUT ANY EXPRESS OR IMPLIED
 * WARRANTIES, INCLUDING, WITHOUT LIMITATION, THE IMPLIED WARRANTIES
 * OF MERCHANTABILITY AND FITNESS FOR A PARTICULAR PURPOSE.
 */
#ifndef INCLUDE_KDTREE_KDTREE_HPP
#define INCLUDE_KDTREE_KDTREE_HPP
 
 
//
//  This number is guaranteed to change with every release.
//
//  KDTREE_VERSION % 100 is the patch level
//  KDTREE_VERSION / 100 % 1000 is the minor version
//  KDTREE_VERSION / 100000 is the major version
#define KDTREE_VERSION 701
//
//  KDTREE_LIB_VERSION must be defined to be the same as KDTREE_VERSION
//  but as a *string* in the form "x_y[_z]" where x is the major version
//  number, y is the minor version number, and z is the patch level if not 0.
#define KDTREE_LIB_VERSION "0_7_1"
 
 
#include <vector>
 
#ifdef KDTREE_CHECK_PERFORMANCE_COUNTERS
#  include <map>
#endif
#include <algorithm>
#include <functional>
 
#ifdef KDTREE_DEFINE_OSTREAM_OPERATORS
#  include <ostream>
#  include <stack>
#endif
 
#include <cmath>
#include <cstddef>
#include <cassert>
 
namespace KDTree
{
 
#ifdef KDTREE_CHECK_PERFORMANCE
unsigned long long num_dist_calcs = 0;
#endif
 
template <size_t const __K, typename _Val,
          typename _Acc = _Bracket_accessor<_Val>,
          typename _Dist = squared_difference<typename _Acc::result_type,
                                              typename _Acc::result_type>,
          typename _Cmp = std::less<typename _Acc::result_type>,
          typename _Alloc = std::allocator<_Node<_Val> > >
class KDTree : protected _Alloc_base<_Val, _Alloc>
{
protected:
  typedef _Alloc_base<_Val, _Alloc> _Base;
  typedef typename _Base::allocator_type allocator_type;
 
  typedef _Node_base* _Base_ptr;
  typedef _Node_base const* _Base_const_ptr;
  typedef _Node<_Val>* _Link_type;
  typedef _Node<_Val> const* _Link_const_type;
 
  typedef _Node_compare<_Val, _Acc, _Cmp> _Node_compare_;
 
public:
  typedef _Region<__K, _Val, typename _Acc::result_type, _Acc, _Cmp> _Region_;
  typedef _Val value_type;
  typedef value_type* pointer;
  typedef value_type const* const_pointer;
  typedef value_type& reference;
  typedef value_type const& const_reference;
  typedef typename _Acc::result_type subvalue_type;
  typedef typename _Dist::distance_type distance_type;
  typedef size_t size_type;
  typedef ptrdiff_t difference_type;
 
  KDTree(_Acc const& __acc = _Acc(), _Dist const& __dist = _Dist(),
         _Cmp const& __cmp = _Cmp(), const allocator_type& __a = allocator_type())
    : _Base(__a), _M_header(),
      _M_count(0), _M_acc(__acc), _M_cmp(__cmp), _M_dist(__dist)
  {
    _M_empty_initialise();
  }
 
  KDTree(const KDTree& __x)
    : _Base(__x.get_allocator()), _M_header(), _M_count(0),
      _M_acc(__x._M_acc), _M_cmp(__x._M_cmp), _M_dist(__x._M_dist)
  {
    _M_empty_initialise();
    // this is slow:
    // this->insert(begin(), __x.begin(), __x.end());
    // this->optimise();
 
    // this is much faster, as it skips a lot of useless work
    // do the optimisation before inserting
    // Needs to be stored in a vector first as _M_optimise()
    // sorts the data in the passed iterators directly.
    std::vector<value_type> temp;
    temp.reserve(__x.size());
    std::copy(__x.begin(),__x.end(),std::back_inserter(temp));
    _M_optimise(temp.begin(), temp.end(), 0);
  }
 
  template<typename _InputIterator>
  KDTree(_InputIterator __first, _InputIterator __last,
         _Acc const& acc = _Acc(), _Dist const& __dist = _Dist(),
         _Cmp const& __cmp = _Cmp(), const allocator_type& __a = allocator_type())
    : _Base(__a), _M_header(), _M_count(0),
      _M_acc(acc), _M_cmp(__cmp), _M_dist(__dist)
  {
    _M_empty_initialise();
    // this is slow:
    // this->insert(begin(), __first, __last);
    // this->optimise();
 
    // this is much faster, as it skips a lot of useless work
    // do the optimisation before inserting
    // Needs to be stored in a vector first as _M_optimise()
    // sorts the data in the passed iterators directly.
    std::vector<value_type> temp;
    temp.reserve(std::distance(__first,__last));
    std::copy(__first,__last,std::back_inserter(temp));
    _M_optimise(temp.begin(), temp.end(), 0);
 
    // NOTE: this will BREAK users that are passing in
    // read-once data via the iterator...
    // We increment __first all the way to __last once within
    // the distance() call, and again within the copy() call.
    //
    // This should end up using some funky C++ concepts or
    // type traits to check that the iterators can be used in this way...
  }
 
 
  // this will CLEAR the tree and fill it with the contents
  // of 'writable_vector'.  it will use the passed vector directly,
  // and will basically resort the vector many times over while
  // optimising the tree.
  //
  // Paul: I use this when I have already built up a vector of data
  // that I want to add, and I don't mind if its contents get shuffled
  // by the kdtree optimise routine.
  void efficient_replace_and_optimise( std::vector<value_type> & writable_vector )
  {
    this->clear();
    _M_optimise(writable_vector.begin(), writable_vector.end(), 0);
  }
 
 
 
  KDTree&
  operator=(const KDTree& __x)
  {
    if (this != &__x)
    {
      _M_acc = __x._M_acc;
      _M_dist = __x._M_dist;
      _M_cmp = __x._M_cmp;
      // this is slow:
      // this->insert(begin(), __x.begin(), __x.end());
      // this->optimise();
 
      // this is much faster, as it skips a lot of useless work
      // do the optimisation before inserting
      // Needs to be stored in a vector first as _M_optimise()
      // sorts the data in the passed iterators directly.
      std::vector<value_type> temp;
      temp.reserve(__x.size());
      std::copy(__x.begin(),__x.end(),std::back_inserter(temp));
      efficient_replace_and_optimise(temp);
    }
    return *this;
  }
 
  ~KDTree()
  {
    this->clear();
  }
 
  allocator_type
  get_allocator() const
  {
    return _Base::get_allocator();
  }
 
  size_type
  size() const
  {
    return _M_count;
  }
 
  size_type
  max_size() const
  {
    return size_type(-1);
  }
 
  bool
  empty() const
  {
    return this->size() == 0;
  }
 
  void
  clear()
  {
    _M_erase_subtree(_M_get_root());
    _M_set_leftmost(&_M_header);
    _M_set_rightmost(&_M_header);
    _M_set_root(nullptr);
    _M_count = 0;
  }
 
  _Cmp
  value_comp() const
  { return _M_cmp; }
 
  _Acc
  value_acc() const
  { return _M_acc; }
 
  const _Dist&
  value_distance() const
  { return _M_dist; }
 
  _Dist&
  value_distance()
  { return _M_dist; }
 
  // typedef _Iterator<_Val, reference, pointer> iterator;
  typedef _Iterator<_Val, const_reference, const_pointer> const_iterator;
  // No mutable iterator at this stage
  typedef const_iterator iterator;
  typedef std::reverse_iterator<const_iterator> const_reverse_iterator;
  typedef std::reverse_iterator<iterator> reverse_iterator;
 
  // Note: the static_cast in end() is invalid (_M_header is not convertible to a _Link_type), but
  // that's ok as it just means undefined behaviour if the user dereferences the end() iterator.
 
  const_iterator begin() const { return const_iterator(_M_get_leftmost()); }
  const_iterator end() const { return const_iterator(static_cast<_Link_const_type>(&_M_header)); }
  const_reverse_iterator rbegin() const { return const_reverse_iterator(end()); }
  const_reverse_iterator rend() const { return const_reverse_iterator(begin()); }
 
  iterator
  insert(iterator /* ignored */, const_reference __V)
  {
    return this->insert(__V);
  }
 
  iterator
  insert(const_reference __V)
  {
    if (!_M_get_root())
    {
      _Link_type __n = _M_new_node(__V, &_M_header);
      ++_M_count;
      _M_set_root(__n);
      _M_set_leftmost(__n);
      _M_set_rightmost(__n);
      return iterator(__n);
    }
    return _M_insert(_M_get_root(), __V, 0);
  }
 
  template <class _InputIterator>
  void insert(_InputIterator __first, _InputIterator __last) {
    for (; __first != __last; ++__first)
      this->insert(*__first);
  }
 
  void
  insert(iterator __pos, size_type __n, const value_type& __x)
  {
    for (; __n > 0; --__n)
      this->insert(__pos, __x);
  }
 
  template<typename _InputIterator>
  void
  insert(iterator __pos, _InputIterator __first, _InputIterator __last) {
    for (; __first != __last; ++__first)
      this->insert(__pos, *__first);
  }
 
  // Note: this uses the find() to location the item you want to erase.
  // find() compares by equivalence of location ONLY.  See the comments
  // above find_exact() for why you may not want this.
  //
  // If you want to erase ANY item that has the same location as __V,
  // then use this function.
  //
  // If you want to erase a PARTICULAR item, and not any other item
  // that might happen to have the same location, then you should use
  // erase_exact().
  void
  erase(const_reference __V) {
    const_iterator b =  this->find(__V);
    this->erase(b);
  }
 
  void
  erase_exact(const_reference __V) {
    this->erase(this->find_exact(__V));
  }
 
  // note: kept as const because its easier to const-cast it away
  void
  erase(const_iterator const& __IT)
  {
    assert(__IT != this->end());
    _Link_const_type target = __IT.get_raw_node();
    _Link_const_type n = target;
    size_type level = 0;
    while ((n = _S_parent(n)) != &_M_header)
      ++level;
    _M_erase( const_cast<_Link_type>(target), level );
    _M_delete_node( const_cast<_Link_type>(target) );
    --_M_count;
  }
 
  /* this does not work since erasure changes sort order
      void
      erase(const_iterator __A, const_iterator const& __B)
      {
        if (0 && __A == this->begin() && __B == this->end())
          {
            this->clear();
          }
        else
          {
            while (__A != __B)
              this->erase(__A++);
          }
      }
*/
 
  // compares via equivalence
  // so if you are looking for any item with the same location,
  // according to the standard accessor comparisons,
  // then this is the function for you.
  template <class SearchVal>
  const_iterator
  find(SearchVal const& __V) const
  {
    if (!_M_get_root()) return this->end();
    return _M_find(_M_get_root(), __V, 0);
  }
 
  // compares via equality
  // if you are looking for a particular item in the tree,
  // and (for example) it has an ID that is checked via an == comparison
  // e.g.
  // struct Item
  // {
  //    size_type unique_id;
  //    bool operator==(Item const& a, Item const& b) { return a.unique_id == b.unique_id; }
  //    Location location;
  // };
  // Two items may be equivalent in location.  find() would return
  // either one of them.  But no two items have the same ID, so
  // find_exact() would always return the item with the same location AND id.
  //
  template <class SearchVal>
  const_iterator
  find_exact(SearchVal const& __V) const
  {
    if (!_M_get_root()) return this->end();
    return _M_find_exact(_M_get_root(), __V, 0);
  }
 
  // NOTE: see notes on find_within_range().
  size_type
  count_within_range(const_reference __V, subvalue_type const __R) const
  {
    if (!_M_get_root()) return 0;
    _Region_ __region(__V, __R, _M_acc, _M_cmp);
    return this->count_within_range(__region);
  }
 
  size_type
  count_within_range(_Region_ const& __REGION) const
  {
    if (!_M_get_root()) return 0;
 
    _Region_ __bounds(__REGION);
    return _M_count_within_range(_M_get_root(),
                                 __REGION, __bounds, 0);
  }
 
  // NOTE: see notes on find_within_range().
  template <typename SearchVal, class Visitor>
  Visitor
  visit_within_range(SearchVal const& V, subvalue_type const R, Visitor visitor) const
  {
    if (!_M_get_root()) return visitor;
    _Region_ region(V, R, _M_acc, _M_cmp);
    return this->visit_within_range(region, visitor);
  }
 
  template <class Visitor>
  Visitor
  visit_within_range(_Region_ const& REGION, Visitor visitor) const
  {
    if (_M_get_root())
    {
      _Region_ bounds(REGION);
      return _M_visit_within_range(visitor, _M_get_root(), REGION, bounds, 0);
    }
    return visitor;
  }
 
  // NOTE: this will visit points based on 'Manhattan distance' aka city-block distance
  // aka taxicab metric. Meaning it will find all points within:
  //    max(x_dist,max(y_dist,z_dist));
  //  AND NOT than what you would expect: sqrt(x_dist*x_dist + y_dist*y_dist + z_dist*z_dist)
  //
  // This is because it converts the distance into a bounding-box 'region' and compares
  // against that.
  //
  // If you want the sqrt() behaviour, ask on the mailing list for different options.
  //
  template <typename SearchVal, typename _OutputIterator>
  _OutputIterator
  find_within_range(SearchVal const& val, subvalue_type const range,
                    _OutputIterator out) const
  {
    if (!_M_get_root()) return out;
    _Region_ region(val, range, _M_acc, _M_cmp);
    return this->find_within_range(region, out);
  }
 
  template <typename _OutputIterator>
  _OutputIterator
  find_within_range(_Region_ const& region,
                    _OutputIterator out) const
  {
    if (_M_get_root())
    {
      _Region_ bounds(region);
      out = _M_find_within_range(out, _M_get_root(),
                                 region, bounds, 0);
    }
    return out;
  }
 
  template <class SearchVal>
  std::pair<const_iterator, distance_type>
  find_nearest (SearchVal const& __val) const
  {
    if (_M_get_root())
    {
      std::pair<const _Node<_Val>*,
          std::pair<size_type, typename _Acc::result_type> >
          best = _S_node_nearest (__K, 0, __val,
                                  _M_get_root(), &_M_header, _M_get_root(),
                                  std::sqrt(_S_accumulate_node_distance
                                            (__K, _M_dist, _M_acc, _M_get_root()->_M_value, __val)),
                                  _M_cmp, _M_acc, _M_dist,
                                  always_true<value_type>());
      return std::pair<const_iterator, distance_type>
          (best.first, best.second.second);
    }
    return std::pair<const_iterator, distance_type>(end(), 0);
  }
 
  template <class SearchVal>
  std::pair<const_iterator, distance_type>
  find_nearest (SearchVal const& __val, distance_type __max) const
  {
    if (_M_get_root())
    {
      bool root_is_candidate = false;
      const _Node<_Val>* node = _M_get_root();
      { // scope to ensure we don't use 'root_dist' anywhere else
        distance_type root_dist = std::sqrt(_S_accumulate_node_distance
                                            (__K, _M_dist, _M_acc, _M_get_root()->_M_value, __val));
        if (root_dist <= __max)
        {
          root_is_candidate = true;
          __max = root_dist;
        }
      }
      std::pair<const _Node<_Val>*,
          std::pair<size_type, typename _Acc::result_type> >
          best = _S_node_nearest (__K, 0, __val, _M_get_root(), &_M_header,
                                  node, __max, _M_cmp, _M_acc, _M_dist,
                                  always_true<value_type>());
      // make sure we didn't just get stuck with the root node...
      if (root_is_candidate || best.first != _M_get_root())
        return std::pair<const_iterator, distance_type>
            (best.first, best.second.second);
    }
    return std::pair<const_iterator, distance_type>(end(), __max);
  }
 
  template <class SearchVal, class _Predicate>
  std::pair<const_iterator, distance_type>
  find_nearest_if (SearchVal const& __val, distance_type __max,
                   _Predicate __p) const
  {
    if (_M_get_root())
    {
      bool root_is_candidate = false;
      const _Node<_Val>* node = _M_get_root();
      if (__p(_M_get_root()->_M_value))
      {
        { // scope to ensure we don't use root_dist anywhere else
          distance_type root_dist = std::sqrt(_S_accumulate_node_distance
                                              (__K, _M_dist, _M_acc, _M_get_root()->_M_value, __val));
          if (root_dist <= __max)
          {
            root_is_candidate = true;
            root_dist = __max;
          }
        }
      }
      std::pair<const _Node<_Val>*,
          std::pair<size_type, typename _Acc::result_type> >
          best = _S_node_nearest (__K, 0, __val, _M_get_root(), &_M_header,
                                  node, __max, _M_cmp, _M_acc, _M_dist, __p);
      // make sure we didn't just get stuck with the root node...
      if (root_is_candidate || best.first != _M_get_root())
        return std::pair<const_iterator, distance_type>
            (best.first, best.second.second);
    }
    return std::pair<const_iterator, distance_type>(end(), __max);
  }
 
  void
  optimise()
  {
    std::vector<value_type> __v(this->begin(),this->end());
    this->clear();
    _M_optimise(__v.begin(), __v.end(), 0);
  }
 
  void
  optimize()
  { // cater for people who cannot spell :)
    this->optimise();
  }
 
  void check_tree()
  {
    _M_check_node(_M_get_root(),0);
  }
 
protected:
 
  void _M_check_children( _Link_const_type child, _Link_const_type parent, size_type const level, bool to_the_left )
  {
    assert(parent);
    if (child)
    {
      _Node_compare_ compare(level % __K, _M_acc, _M_cmp);
      // REMEMBER! its a <= relationship for BOTH branches
      // for left-case (true), child<=node --> !(node<child)
      // for right-case (false), node<=child --> !(child<node)
      assert(!to_the_left || !compare(parent->_M_value,child->_M_value));  // check the left
      assert(to_the_left || !compare(child->_M_value,parent->_M_value));   // check the right
      // and recurse down the tree, checking everything
      _M_check_children(_S_left(child),parent,level,to_the_left);
      _M_check_children(_S_right(child),parent,level,to_the_left);
    }
  }
 
  void _M_check_node( _Link_const_type node, size_type const level )
  {
    if (node)
    {
      // (comparing on this level)
      // everything to the left of this node must be smaller than this
      _M_check_children( _S_left(node), node, level, true );
      // everything to the right of this node must be larger than this
      _M_check_children( _S_right(node), node, level, false );
 
      _M_check_node( _S_left(node), level+1 );
      _M_check_node( _S_right(node), level+1 );
    }
  }
 
  void _M_empty_initialise()
  {
    _M_set_leftmost(&_M_header);
    _M_set_rightmost(&_M_header);
    _M_header._M_parent = nullptr;
    _M_set_root(nullptr);
  }
 
  iterator
  _M_insert_left(_Link_type __N, const_reference __V)
  {
    _S_set_left(__N, _M_new_node(__V)); ++_M_count;
    _S_set_parent( _S_left(__N), __N );
    if (__N == _M_get_leftmost())
      _M_set_leftmost( _S_left(__N) );
    return iterator(_S_left(__N));
  }
 
  iterator
  _M_insert_right(_Link_type __N, const_reference __V)
  {
    _S_set_right(__N, _M_new_node(__V)); ++_M_count;
    _S_set_parent( _S_right(__N), __N );
    if (__N == _M_get_rightmost())
      _M_set_rightmost( _S_right(__N) );
    return iterator(_S_right(__N));
  }
 
  iterator
  _M_insert(_Link_type __N, const_reference __V,
            size_type const __L)
  {
    if (_Node_compare_(__L % __K, _M_acc, _M_cmp)(__V, __N->_M_value))
    {
      if (!_S_left(__N))
        return _M_insert_left(__N, __V);
      return _M_insert(_S_left(__N), __V, __L+1);
    }
    else
    {
      if (!_S_right(__N) || __N == _M_get_rightmost())
        return _M_insert_right(__N, __V);
      return _M_insert(_S_right(__N), __V, __L+1);
    }
  }
 
  _Link_type
  _M_erase(_Link_type dead_dad, size_type const level)
  {
    // find a new step_dad, he will become a drop-in replacement.
    _Link_type step_dad = _M_get_erase_replacement(dead_dad, level);
 
    // tell dead_dad's parent that his new child is step_dad
    if (dead_dad == _M_get_root())
      _M_set_root(step_dad);
    else if (_S_left(_S_parent(dead_dad)) == dead_dad)
      _S_set_left(_S_parent(dead_dad), step_dad);
    else
      _S_set_right(_S_parent(dead_dad), step_dad);
 
    // deal with the left and right edges of the tree...
    // if the dead_dad was at the edge, then substitute...
    // but if there IS no new dead, then left_most is the dead_dad's parent
    if (dead_dad == _M_get_leftmost())
      _M_set_leftmost( (step_dad ? step_dad : _S_parent(dead_dad)) );
    if (dead_dad == _M_get_rightmost())
      _M_set_rightmost( (step_dad ? step_dad : _S_parent(dead_dad)) );
 
    if (step_dad)
    {
      // step_dad gets dead_dad's parent
      _S_set_parent(step_dad, _S_parent(dead_dad));
 
      // first tell the children that step_dad is their new dad
      if (_S_left(dead_dad))
        _S_set_parent(_S_left(dead_dad), step_dad);
      if (_S_right(dead_dad))
        _S_set_parent(_S_right(dead_dad), step_dad);
 
      // step_dad gets dead_dad's children
      _S_set_left(step_dad, _S_left(dead_dad));
      _S_set_right(step_dad, _S_right(dead_dad));
    }
 
    return step_dad;
  }
 
 
 
  _Link_type
  _M_get_erase_replacement(_Link_type node, size_type const level)
  {
    // if 'node' is null, then we can't do any better
    if (_S_is_leaf(node))
      return NULL;
 
    std::pair<_Link_type,size_type> candidate;
    // if there is nothing to the left, find a candidate on the right tree
    if (!_S_left(node))
      candidate = _M_get_j_min( std::pair<_Link_type,size_type>(_S_right(node),level), level+1);
    // ditto for the right
    else if ((!_S_right(node)))
      candidate = _M_get_j_max( std::pair<_Link_type,size_type>(_S_left(node),level), level+1);
    // we have both children ...
    else
    {
      // we need to do a little more work in order to find a good candidate
      // this is actually a technique used to choose a node from either the
      // left or right branch RANDOMLY, so that the tree has a greater change of
      // staying balanced.
      // If this were a true binary tree, we would always hunt down the right branch.
      // See top for notes.
      _Node_compare_ compare(level % __K, _M_acc, _M_cmp);
      // compare the children based on this level's criteria...
      // (this gives virtually random results)
      if (compare(_S_right(node)->_M_value, _S_left(node)->_M_value))
        // the right is smaller, get our replacement from the SMALLEST on the right
        candidate = _M_get_j_min(std::pair<_Link_type,size_type>(_S_right(node),level), level+1);
      else
        candidate = _M_get_j_max( std::pair<_Link_type,size_type>(_S_left(node),level), level+1);
    }
 
    // we have a candidate replacement by now.
    // remove it from the tree, but don't delete it.
    // it must be disconnected before it can be reconnected.
    _Link_type parent = _S_parent(candidate.first);
    if (_S_left(parent) == candidate.first)
      _S_set_left(parent, _M_erase(candidate.first, candidate.second));
    else
      _S_set_right(parent, _M_erase(candidate.first, candidate.second));
 
    return candidate.first;
  }
 
 
 
  // TODO: why not pass node by const-ref?
  std::pair<_Link_type,size_type>
  _M_get_j_min( std::pair<_Link_type,size_type> const node, size_type const level)
  {
    typedef std::pair<_Link_type,size_type> Result;
    if (_S_is_leaf(node.first))
      return Result(node.first,level);
 
    _Node_compare_ compare(node.second % __K, _M_acc, _M_cmp);
    Result candidate = node;
    if (_S_left(node.first))
    {
      Result left = _M_get_j_min(Result(_S_left(node.first), node.second), level+1);
      if (compare(left.first->_M_value, candidate.first->_M_value))
        candidate = left;
    }
    if (_S_right(node.first))
    {
      Result right = _M_get_j_min( Result(_S_right(node.first),node.second), level+1);
      if (compare(right.first->_M_value, candidate.first->_M_value))
        candidate = right;
    }
    if (candidate.first == node.first)
      return Result(candidate.first,level);
 
    return candidate;
  }
 
 
 
  // TODO: why not pass node by const-ref?
  std::pair<_Link_type,size_type>
  _M_get_j_max( std::pair<_Link_type,size_type> const node, size_type const level)
  {
    typedef std::pair<_Link_type,size_type> Result;
 
    if (_S_is_leaf(node.first))
      return Result(node.first,level);
 
    _Node_compare_ compare(node.second % __K, _M_acc, _M_cmp);
    Result candidate = node;
    if (_S_left(node.first))
    {
      Result left = _M_get_j_max( Result(_S_left(node.first),node.second), level+1);
      if (compare(candidate.first->_M_value, left.first->_M_value))
        candidate = left;
    }
    if (_S_right(node.first))
    {
      Result right = _M_get_j_max(Result(_S_right(node.first),node.second), level+1);
      if (compare(candidate.first->_M_value, right.first->_M_value))
        candidate = right;
    }
 
    if (candidate.first == node.first)
      return Result(candidate.first,level);
 
    return candidate;
  }
 
 
  void
  _M_erase_subtree(_Link_type __n)
  {
    while (__n)
    {
      _M_erase_subtree(_S_right(__n));
      _Link_type __t = _S_left(__n);
      _M_delete_node(__n);
      __n = __t;
    }
  }
 
  const_iterator
  _M_find(_Link_const_type node, const_reference value, size_type const level) const
  {
    // be aware! This is very different to normal binary searches, because of the <=
    // relationship used. See top for notes.
    // Basically we have to check ALL branches, as we may have an identical node
    // in different branches.
    const_iterator found = this->end();
 
    _Node_compare_ compare(level % __K, _M_acc, _M_cmp);
    if (!compare(node->_M_value,value))   // note, this is a <= test
    {
      // this line is the only difference between _M_find_exact() and _M_find()
      if (_M_matches_node(node, value, level))
        return const_iterator(node);   // return right away
      if (_S_left(node))
        found = _M_find(_S_left(node), value, level+1);
    }
    if ( _S_right(node) && found == this->end() && !compare(value,node->_M_value))   // note, this is a <= test
      found = _M_find(_S_right(node), value, level+1);
    return found;
  }
 
  const_iterator
  _M_find_exact(_Link_const_type node, const_reference value, size_type const level) const
  {
    // be aware! This is very different to normal binary searches, because of the <=
    // relationship used. See top for notes.
    // Basically we have to check ALL branches, as we may have an identical node
    // in different branches.
    const_iterator found = this->end();
 
    _Node_compare_ compare(level % __K, _M_acc, _M_cmp);
    if (!compare(node->_M_value,value))  // note, this is a <= test
    {
      // this line is the only difference between _M_find_exact() and _M_find()
      if (value == *const_iterator(node))
        return const_iterator(node);   // return right away
      if (_S_left(node))
        found = _M_find_exact(_S_left(node), value, level+1);
    }
 
    // note: no else!  items that are identical can be down both branches
    if ( _S_right(node) && found == this->end() && !compare(value,node->_M_value))   // note, this is a <= test
      found = _M_find_exact(_S_right(node), value, level+1);
    return found;
  }
 
  bool
  _M_matches_node_in_d(_Link_const_type __N, const_reference __V,
                       size_type const __L) const
  {
    _Node_compare_ compare(__L % __K, _M_acc, _M_cmp);
    return !(compare(__N->_M_value, __V) || compare(__V, __N->_M_value));
  }
 
  bool
  _M_matches_node_in_other_ds(_Link_const_type __N, const_reference __V,
                              size_type const __L = 0) const
  {
    size_type __i = __L;
    while ((__i = (__i + 1) % __K) != __L % __K)
      if (!_M_matches_node_in_d(__N, __V, __i)) return false;
    return true;
  }
 
  bool
  _M_matches_node(_Link_const_type __N, const_reference __V,
                  size_type __L = 0) const
  {
    return _M_matches_node_in_d(__N, __V, __L)
        && _M_matches_node_in_other_ds(__N, __V, __L);
  }
 
  size_type
  _M_count_within_range(_Link_const_type __N, _Region_ const& __REGION,
                        _Region_ const& __BOUNDS,
                        size_type const __L) const
  {
    size_type count = 0;
    if (__REGION.encloses(_S_value(__N)))
    {
      ++count;
    }
    if (_S_left(__N))
    {
      _Region_ __bounds(__BOUNDS);
      __bounds.set_high_bound(_S_value(__N), __L);
      if (__REGION.intersects_with(__bounds))
        count += _M_count_within_range(_S_left(__N),
                                       __REGION, __bounds, __L+1);
    }
    if (_S_right(__N))
    {
      _Region_ __bounds(__BOUNDS);
      __bounds.set_low_bound(_S_value(__N), __L);
      if (__REGION.intersects_with(__bounds))
        count += _M_count_within_range(_S_right(__N),
                                       __REGION, __bounds, __L+1);
    }
 
    return count;
  }
 
 
  template <class Visitor>
  Visitor
  _M_visit_within_range(Visitor visitor,
                        _Link_const_type N, _Region_ const& REGION,
                        _Region_ const& BOUNDS,
                        size_type const L) const
  {
    if (REGION.encloses(_S_value(N)))
    {
      visitor(_S_value(N));
    }
    if (_S_left(N))
    {
      _Region_ bounds(BOUNDS);
      bounds.set_high_bound(_S_value(N), L);
      if (REGION.intersects_with(bounds))
        visitor = _M_visit_within_range(visitor, _S_left(N),
                                        REGION, bounds, L+1);
    }
    if (_S_right(N))
    {
      _Region_ bounds(BOUNDS);
      bounds.set_low_bound(_S_value(N), L);
      if (REGION.intersects_with(bounds))
        visitor = _M_visit_within_range(visitor, _S_right(N),
                                        REGION, bounds, L+1);
    }
 
    return visitor;
  }
 
 
 
  template <typename _OutputIterator>
  _OutputIterator
  _M_find_within_range(_OutputIterator out,
                       _Link_const_type __N, _Region_ const& __REGION,
                       _Region_ const& __BOUNDS,
                       size_type const __L) const
  {
    if (__REGION.encloses(_S_value(__N)))
    {
      *out++ = _S_value(__N);
    }
    if (_S_left(__N))
    {
      _Region_ __bounds(__BOUNDS);
      __bounds.set_high_bound(_S_value(__N), __L);
      if (__REGION.intersects_with(__bounds))
        out = _M_find_within_range(out, _S_left(__N),
                                   __REGION, __bounds, __L+1);
    }
    if (_S_right(__N))
    {
      _Region_ __bounds(__BOUNDS);
      __bounds.set_low_bound(_S_value(__N), __L);
      if (__REGION.intersects_with(__bounds))
        out = _M_find_within_range(out, _S_right(__N),
                                   __REGION, __bounds, __L+1);
    }
 
    return out;
  }
 
 
  template <typename _Iter>
  void
  _M_optimise(_Iter const& __A, _Iter const& __B,
              size_type const __L)
  {
    if (__A == __B) return;
    _Node_compare_ compare(__L % __K, _M_acc, _M_cmp);
    _Iter __m = __A + (__B - __A) / 2;
    std::nth_element(__A, __m, __B, compare);
    this->insert(*__m);
    if (__m != __A) _M_optimise(__A, __m, __L+1);
    if (++__m != __B) _M_optimise(__m, __B, __L+1);
  }
 
  _Link_const_type
  _M_get_root() const
  {
    return const_cast<_Link_const_type>(_M_root);
  }
 
  _Link_type
  _M_get_root()
  {
    return _M_root;
  }
 
  void _M_set_root(_Link_type n)
  {
    _M_root = n;
  }
 
  _Link_const_type
  _M_get_leftmost() const
  {
    return static_cast<_Link_type>(_M_header._M_left);
  }
 
  void
  _M_set_leftmost( _Node_base * a )
  {
    _M_header._M_left = a;
  }
 
  _Link_const_type
  _M_get_rightmost() const
  {
    return static_cast<_Link_type>( _M_header._M_right );
  }
 
  void
  _M_set_rightmost( _Node_base * a )
  {
    _M_header._M_right = a;
  }
 
  static _Link_type
  _S_parent(_Base_ptr N)
  {
    return static_cast<_Link_type>( N->_M_parent );
  }
 
  static _Link_const_type
  _S_parent(_Base_const_ptr N)
  {
    return static_cast<_Link_const_type>( N->_M_parent );
  }
 
  static void
  _S_set_parent(_Base_ptr N, _Base_ptr p)
  {
    N->_M_parent = p;
  }
 
  static void
  _S_set_left(_Base_ptr N, _Base_ptr l)
  {
    N->_M_left = l;
  }
 
  static _Link_type
  _S_left(_Base_ptr N)
  {
    return static_cast<_Link_type>( N->_M_left );
  }
 
  static _Link_const_type
  _S_left(_Base_const_ptr N)
  {
    return static_cast<_Link_const_type>( N->_M_left );
  }
 
  static void
  _S_set_right(_Base_ptr N, _Base_ptr r)
  {
    N->_M_right = r;
  }
 
  static _Link_type
  _S_right(_Base_ptr N)
  {
    return static_cast<_Link_type>( N->_M_right );
  }
 
  static _Link_const_type
  _S_right(_Base_const_ptr N)
  {
    return static_cast<_Link_const_type>( N->_M_right );
  }
 
  static bool
  _S_is_leaf(_Base_const_ptr N)
  {
    return !_S_left(N) && !_S_right(N);
  }
 
  static const_reference
  _S_value(_Link_const_type N)
  {
    return N->_M_value;
  }
 
  static const_reference
  _S_value(_Base_const_ptr N)
  {
    return static_cast<_Link_const_type>(N)->_M_value;
  }
 
  static _Link_const_type
  _S_minimum(_Link_const_type __X)
  {
    return static_cast<_Link_const_type> ( _Node_base::_S_minimum(__X) );
  }
 
  static _Link_const_type
  _S_maximum(_Link_const_type __X)
  {
    return static_cast<_Link_const_type>( _Node_base::_S_maximum(__X) );
  }
 
 
  _Link_type
  _M_new_node(const_reference __V, //  = value_type(),
              _Base_ptr const __PARENT = nullptr,
              _Base_ptr const __LEFT = nullptr,
              _Base_ptr const __RIGHT = nullptr)
  {
    typename _Base::NoLeakAlloc noleak(this);
    _Link_type new_node = noleak.get();
    _Base::_M_construct_node(new_node, __V, __PARENT, __LEFT, __RIGHT);
    noleak.disconnect();
    return new_node;
  }
 
  /* WHAT was this for?
      _Link_type
      _M_clone_node(_Link_const_type __X)
      {
        _Link_type __ret = _M_allocate_node(__X->_M_value);
        // TODO
        return __ret;
      }
      */
 
  void
  _M_delete_node(_Link_type __p)
  {
    _Base::_M_destroy_node(__p);
    _Base::_M_deallocate_node(__p);
  }
 
  _Link_type _M_root;
  _Node_base _M_header;
  size_type _M_count;
  _Acc _M_acc;
  _Cmp _M_cmp;
  _Dist _M_dist;
 
#ifdef KDTREE_DEFINE_OSTREAM_OPERATORS
  friend std::ostream&
  operator<<(std::ostream& o,
             KDTree<__K, _Val, _Acc, _Dist, _Cmp, _Alloc> const& tree)
  {
    o << "meta node:   " << tree._M_header << std::endl;
    o << "root node:   " << tree._M_root << std::endl;
 
    if (tree.empty())
      return o << "[empty " << __K << "d-tree " << &tree << "]";
 
    o << "nodes total: " << tree.size() << std::endl;
    o << "dimensions:  " << __K << std::endl;
 
    typedef KDTree<__K, _Val, _Acc, _Dist, _Cmp, _Alloc> _Tree;
    typedef typename _Tree::_Link_type _Link_type;
 
    std::stack<_Link_const_type> s;
    s.push(tree._M_get_root());
 
    while (!s.empty())
    {
      _Link_const_type n = s.top();
      s.pop();
      o << *n << std::endl;
      if (_Tree::_S_left(n)) s.push(_Tree::_S_left(n));
      if (_Tree::_S_right(n)) s.push(_Tree::_S_right(n));
    }
 
    return o;
  }
#endif
 
};
 
 
} // namespace KDTree
 
#endif // include guard
 
/* COPYRIGHT --
 *
 * This file is part of libkdtree++, a C++ template KD-Tree sorting container.
 * libkdtree++ is (c) 2004-2007 Martin F. Krafft <libkdtree@pobox.madduck.net>
 * and Sylvain Bougerel <sylvain.bougerel.devel@gmail.com> distributed under the
 * terms of the Artistic License 2.0. See the ./COPYING file in the source tree
 * root for more information.
 * Parts of this file are (c) 2004-2007 Paul Harris <paulharris@computer.org>.
 *
 * THIS PACKAGE IS PROVIDED "AS IS" AND WITHOUT ANY EXPRESS OR IMPLIED
 * WARRANTIES, INCLUDING, WITHOUT LIMITATION, THE IMPLIED WARRANTIES
 * OF MERCHANTABILITY AND FITNESS FOR A PARTICULAR PURPOSE.
 */