LayerDataIonMobility.h

Go to the documentation of this file.

// Copyright (c) 2002-present, OpenMS Inc. -- EKU Tuebingen, ETH Zurich, and FU Berlin
// SPDX-License-Identifier: BSD-3-Clause
//
// --------------------------------------------------------------------------
// $Maintainer: Chris Bielow $
// $Authors: Chris Bielow $
// --------------------------------------------------------------------------
 
#pragma once
 
#include <OpenMS/VISUAL/LayerDataBase.h>
#include <OpenMS/VISUAL/LayerData1DBase.h>
 
#include <OpenMS/KERNEL/Mobilogram.h>
 
namespace OpenMS
{
  
  class OPENMS_GUI_DLLAPI LayerDataIonMobility : public virtual LayerDataBase
  {
  public:
    using PeakType = Mobilogram::PeakType;
 
    LayerDataIonMobility();
    LayerDataIonMobility(const LayerDataIonMobility& ld);
    LayerDataIonMobility& operator=(const LayerDataIonMobility& ld) = delete;
 
 
    std::unique_ptr<Painter2DBase> getPainter2D() const override;
 
    std::unique_ptr<LayerData1DBase> to1DLayer() const override;
 
    std::unique_ptr<LayerStoreData> storeVisibleData(const RangeAllType& visible_range, const DataFilters& layer_filters) const override;
 
    std::unique_ptr<LayerStoreData> storeFullData() const override;
 
    ProjectionData getProjection(const DIM_UNIT unit_x, const DIM_UNIT unit_y, const RangeAllType& area) const override;
 
    PeakIndex findHighestDataPoint(const RangeAllType& /*area*/) const override
    { // todo: not implemented
      return PeakIndex();
    }
 
    void updateRanges() override
    {
      single_mobilogram_.updateRanges();
      // on_disc_peaks->updateRanges(); // note: this is not going to work since its on disk! We currently don't have a good way to access these ranges
    }
 
    RangeAllType getRange() const override
    {
      RangeAllType r;
      r.assign(single_mobilogram_);
      return r;
    }
 
    // for now, only a single Mobilogram. See class description.
    void setMobilityData(const Mobilogram& mobilogram)
    {
      single_mobilogram_ = mobilogram;
    }
 
    const Mobilogram& getMobilogram(Size index) const
    {
      if (index != 0) throw Exception::InvalidValue(__FILE__, __LINE__, OPENMS_PRETTY_FUNCTION, "Only one mobilogram possible atm.", String(index));
      return single_mobilogram_;
    }
 
    PointXYType peakIndexToXY(const PeakIndex& peak, const DimMapper<2>& mapper) const override;
 
    String getDataArrayDescription(const PeakIndex& peak_index) override;
 
    std::unique_ptr<LayerStatistics> getStats() const override;
 
  protected:
    Mobilogram single_mobilogram_; 
  };
 
}// namespace OpenMS