OpenMS
FLASHDeconvSpectrumFile Member List

This is the complete list of members for FLASHDeconvSpectrumFile, including all inherited members.

topFD_max_peak_count_FLASHDeconvSpectrumFileprivatestatic
topFD_min_peak_count_FLASHDeconvSpectrumFileprivatestatic
writeDeconvolvedMasses(const DeconvolvedSpectrum &dspec, std::ostream &os, const String &file_name, const FLASHHelperClasses::PrecalculatedAveragine &avg, const FLASHHelperClasses::PrecalculatedAveragine &decoy_avg, double tol, bool write_detail, bool record_decoy, double noise_decoy_weight)FLASHDeconvSpectrumFilestatic
writeDeconvolvedMassesHeader(std::ostream &os, uint ms_level, bool detail, bool report_decoy)FLASHDeconvSpectrumFilestatic
writeIsobaricQuantification(std::ostream &os, std::vector< DeconvolvedSpectrum > &deconvolved_spectra)FLASHDeconvSpectrumFilestatic
writeMzML(const MSExperiment &map, std::vector< DeconvolvedSpectrum > &deconvolved_spectra, const String &deconvolved_mzML_file, const String &annotated_mzML_file, int mzml_charge, DoubleList tols)FLASHDeconvSpectrumFilestatic
writeTopFD(const DeconvolvedSpectrum &dspec, std::ostream &os, const String &filename, double qval_threshold=1.0, uint min_ms_level=1, bool randomize_precursor_mass=false, bool randomize_fragment_mass=false)FLASHDeconvSpectrumFilestatic
writeTopFDHeader(std::ostream &os, const Param &param)FLASHDeconvSpectrumFilestatic