 |
OpenMS
|
This is the complete list of members for UnimodXMLHandler, including all inherited members.
| ActionMode enum name | XMLHandler | |
| asBool_(const std::string &in) const | XMLHandler | inlineprotected |
| asDateTime_(std::string date_string) const | XMLHandler | inlineprotected |
| asDouble_(const std::string &in) const | XMLHandler | inlineprotected |
| asFloat_(const std::string &in) const | XMLHandler | inlineprotected |
| asInt_(const std::string &in) const | XMLHandler | inlineprotected |
| asInt_(const char16_t *in) const | XMLHandler | inlineprotected |
| asUInt_(const std::string &in) const | XMLHandler | inlineprotected |
| attributeAsDouble_(const XMLAttributes &a, const char *name) const | XMLHandler | inlineprotected |
| attributeAsDouble_(const XMLAttributes &a, const char16_t *name) const | XMLHandler | inlineprotected |
| attributeAsDoubleList_(const XMLAttributes &a, const char *name) const | XMLHandler | protected |
| attributeAsDoubleList_(const XMLAttributes &a, const char16_t *name) const | XMLHandler | protected |
| attributeAsInt_(const XMLAttributes &a, const char *name) const | XMLHandler | inlineprotected |
| attributeAsInt_(const XMLAttributes &a, const char16_t *name) const | XMLHandler | inlineprotected |
| attributeAsIntList_(const XMLAttributes &a, const char *name) const | XMLHandler | protected |
| attributeAsIntList_(const XMLAttributes &a, const char16_t *name) const | XMLHandler | protected |
| attributeAsString_(const XMLAttributes &a, const char *name) const | XMLHandler | inlineprotected |
| attributeAsString_(const XMLAttributes &a, const char16_t *name) const | XMLHandler | inlineprotected |
| attributeAsStringList_(const XMLAttributes &a, const char *name) const | XMLHandler | protected |
| attributeAsStringList_(const XMLAttributes &a, const char16_t *name) const | XMLHandler | protected |
| avge_mass_ | UnimodXMLHandler | private |
| checkUniqueIdentifiers_(const std::vector< ProteinIdentification > &prot_ids) const | XMLHandler | |
| cv_terms_ | XMLHandler | protected |
| cvParamToValue(const ControlledVocabulary &cv, const std::string &parent_tag, const std::string &accession, const std::string &name, const std::string &value, const std::string &unit_accession) const | XMLHandler | |
| cvParamToValue(const ControlledVocabulary &cv, const CVTerm &raw_term) const | XMLHandler | |
| cvStringToEnum_(const Size section, const std::string &term, const char *message, const SignedSize result_on_error=0) | XMLHandler | protected |
| diff_formula_ | UnimodXMLHandler | private |
| equal_(const char16_t *a, const char16_t *b) const | XMLHandler | inlineprotected |
| error(ActionMode mode, const std::string &msg, UInt line=0, UInt column=0) const | XMLHandler | |
| expectList_(const std::string &str) const | XMLHandler | inlineprivate |
| fatalError(ActionMode mode, const std::string &msg, UInt line=0, UInt column=0) const | XMLHandler | |
| file_ | XMLHandler | protected |
| fromXSDString(const std::string &type, const std::string &value) | XMLHandler | inlinestatic |
| getLoadDetail() const | XMLHandler | virtual |
| LD_ALLDATA enum value | XMLHandler | |
| LD_COUNTS_WITHOPTIONS enum value | XMLHandler | |
| LD_RAWCOUNTS enum value | XMLHandler | |
| LOAD enum value | XMLHandler | |
| load_detail_ | XMLHandler | protected |
| LOADDETAIL enum name | XMLHandler | |
| modification_ | UnimodXMLHandler | private |
| modifications_ | UnimodXMLHandler | private |
| mono_mass_ | UnimodXMLHandler | private |
| neutral_loss_avg_masses_ | UnimodXMLHandler | private |
| neutral_loss_diff_formula_ | UnimodXMLHandler | private |
| neutral_loss_diff_formulas_ | UnimodXMLHandler | private |
| neutral_loss_mono_masses_ | UnimodXMLHandler | private |
| onCharacters(const char16_t *chars, Size) override | UnimodXMLHandler | virtual |
| onEndElement(const char16_t *qname) override | UnimodXMLHandler | virtual |
| onStartElement(const char16_t *qname, const XMLAttributes &attributes) override | UnimodXMLHandler | virtual |
| open_tags_ | XMLHandler | protected |
| optionalAttributeAsDouble_(double &value, const XMLAttributes &a, const char *name) const | XMLHandler | inlineprotected |
| optionalAttributeAsDouble_(double &value, const XMLAttributes &a, const char16_t *name) const | XMLHandler | inlineprotected |
| optionalAttributeAsDoubleList_(DoubleList &value, const XMLAttributes &a, const char *name) const | XMLHandler | inlineprotected |
| optionalAttributeAsDoubleList_(DoubleList &value, const XMLAttributes &a, const char16_t *name) const | XMLHandler | inlineprotected |
| optionalAttributeAsInt_(Int &value, const XMLAttributes &a, const char *name) const | XMLHandler | inlineprotected |
| optionalAttributeAsInt_(Int &value, const XMLAttributes &a, const char16_t *name) const | XMLHandler | inlineprotected |
| optionalAttributeAsIntList_(IntList &value, const XMLAttributes &a, const char *name) const | XMLHandler | inlineprotected |
| optionalAttributeAsIntList_(IntList &value, const XMLAttributes &a, const char16_t *name) const | XMLHandler | inlineprotected |
| optionalAttributeAsString_(std::string &value, const XMLAttributes &a, const char *name) const | XMLHandler | inlineprotected |
| optionalAttributeAsString_(std::string &value, const XMLAttributes &a, const char16_t *name) const | XMLHandler | inlineprotected |
| optionalAttributeAsStringList_(StringList &value, const XMLAttributes &a, const char *name) const | XMLHandler | inlineprotected |
| optionalAttributeAsStringList_(StringList &value, const XMLAttributes &a, const char16_t *name) const | XMLHandler | inlineprotected |
| optionalAttributeAsUInt_(UInt &value, const XMLAttributes &a, const char *name) const | XMLHandler | inlineprotected |
| optionalAttributeAsUInt_(UInt &value, const XMLAttributes &a, const char16_t *name) const | XMLHandler | inlineprotected |
| reset() | XMLHandler | |
| setLoadDetail(const LOADDETAIL d) | XMLHandler | virtual |
| sites_ | UnimodXMLHandler | private |
| sm_ | XMLHandler | protected |
| STORE enum value | XMLHandler | |
| tag_ | UnimodXMLHandler | private |
| term_specs_ | UnimodXMLHandler | private |
| UnimodXMLHandler(std::vector< ResidueModification * > &mods, const std::string &filename) | UnimodXMLHandler | |
| version_ | XMLHandler | protected |
| warning(ActionMode mode, const std::string &msg, UInt line=0, UInt column=0) const | XMLHandler | |
| was_valid_peptide_modification_ | UnimodXMLHandler | private |
| writeTo(std::ostream &) | XMLHandler | virtual |
| writeUserParam_(const std::string &tag_name, std::ostream &os, const MetaInfoInterface &meta, UInt indent) const | XMLHandler | protected |
| writeXMLEscape(const std::string &to_escape) | XMLHandler | inlinestatic |
| XMLHandler(const std::string &filename, const std::string &version) | XMLHandler | |
| XMLHandler() | XMLHandler | private |
| ~UnimodXMLHandler() override | UnimodXMLHandler | |
| ~XMLHandler() | XMLHandler | virtual |
1.9.8 