OpenMS

Statistics for quantitation performance and comparison of NNLS vs. naive method (aka matrix inversion) More...
#include <OpenMS/ANALYSIS/QUANTITATION/IsobaricQuantifierStatistics.h>
Public Member Functions  
IsobaricQuantifierStatistics ()  
Create stats object. More...  
void  reset () 
Reset statistics object. More...  
IsobaricQuantifierStatistics (const IsobaricQuantifierStatistics &other)  
Copy c'tor. More...  
IsobaricQuantifierStatistics &  operator= (const IsobaricQuantifierStatistics &rhs) 
Assignment operator. More...  
Public Attributes  
Size  channel_count 
4plex, 6plex, or 8 plex?! More...  
Size  iso_number_ms2_negative 
number of MS2 spectra where one or more channels had negative solution More...  
Size  iso_number_reporter_negative 
number of channels where naive solution was negative More...  
Size  iso_number_reporter_different 
number of channels >0 where naive solution was different; happens when naive solution is negative in other channels More...  
double  iso_solution_different_intensity 
absolute intensity difference between both solutions (for channels > 0) More...  
double  iso_total_intensity_negative 
only for spectra where naive solution is negative More...  
Size  number_ms2_total 
total number of MS2 spectra More...  
Size  number_ms2_empty 
number of empty MS2 (no reporters at all) More...  
std::map< String, Size >  empty_channels 
Channel_ID > Missing; indicating the number of empty channels from all MS2 scans, i.e., numbers are between number_ms2_empty and number_ms2_total. More...  
Statistics for quantitation performance and comparison of NNLS vs. naive method (aka matrix inversion)
Create stats object.
IsobaricQuantifierStatistics  (  const IsobaricQuantifierStatistics &  other  ) 
Copy c'tor.
IsobaricQuantifierStatistics& operator=  (  const IsobaricQuantifierStatistics &  rhs  ) 
Assignment operator.
void reset  (  ) 
Reset statistics object.
Size channel_count 
4plex, 6plex, or 8 plex?!
Channel_ID > Missing; indicating the number of empty channels from all MS2 scans, i.e., numbers are between number_ms2_empty and number_ms2_total.
Size iso_number_ms2_negative 
number of MS2 spectra where one or more channels had negative solution
Size iso_number_reporter_different 
number of channels >0 where naive solution was different; happens when naive solution is negative in other channels
Size iso_number_reporter_negative 
number of channels where naive solution was negative
double iso_solution_different_intensity 
absolute intensity difference between both solutions (for channels > 0)
double iso_total_intensity_negative 
only for spectra where naive solution is negative
Size number_ms2_empty 
number of empty MS2 (no reporters at all)
Size number_ms2_total 
total number of MS2 spectra