all meta data of a mzTab file. Please refer to specification for documentation. More...

#include <OpenMS/FORMAT/MzTab.h>

Collaboration diagram for MzTabMetaData:

Public Member Functions
	MzTabMetaData ()

Public Attributes
MzTabString	mz_tab_version

MzTabString	mz_tab_mode

MzTabString	mz_tab_type

MzTabString	mz_tab_id

MzTabString	title

MzTabString	description

std::map< Size, MzTabParameter >	protein_search_engine_score

std::map< Size, MzTabParameter >	peptide_search_engine_score

std::map< Size, MzTabParameter >	psm_search_engine_score

std::map< Size, MzTabParameter >	smallmolecule_search_engine_score

std::map< Size, MzTabParameter >	nucleic_acid_search_engine_score

std::map< Size, MzTabParameter >	oligonucleotide_search_engine_score

std::map< Size, MzTabParameter >	osm_search_engine_score

std::map< Size, MzTabParameterList >	sample_processing

std::map< Size, MzTabInstrumentMetaData >	instrument

std::map< Size, MzTabSoftwareMetaData >	software

MzTabParameterList	false_discovery_rate

std::map< Size, MzTabString >	publication

std::map< Size, MzTabContactMetaData >	contact

std::map< Size, MzTabString >	uri

std::map< Size, MzTabModificationMetaData >	fixed_mod

std::map< Size, MzTabModificationMetaData >	variable_mod

MzTabParameter	quantification_method

MzTabParameter	protein_quantification_unit

MzTabParameter	peptide_quantification_unit

MzTabParameter	small_molecule_quantification_unit

std::map< Size, MzTabMSRunMetaData >	ms_run

std::map< Size, MzTabParameter >	custom

std::map< Size, MzTabSampleMetaData >	sample

std::map< Size, MzTabAssayMetaData >	assay

std::map< Size, MzTabStudyVariableMetaData >	study_variable

std::map< Size, MzTabCVMetaData >	cv

std::vector< std::string >	colunit_protein

std::vector< std::string >	colunit_peptide

std::vector< std::string >	colunit_psm

std::vector< std::string >	colunit_small_molecule

Detailed Description

all meta data of a mzTab file. Please refer to specification for documentation.

Constructor & Destructor Documentation

◆ MzTabMetaData()

MzTabMetaData ( )

Member Data Documentation

◆ assay

std::map<Size, MzTabAssayMetaData> assay

◆ colunit_peptide

std::vector<std::string> colunit_peptide

◆ colunit_protein

std::vector<std::string> colunit_protein

◆ colunit_psm

std::vector<std::string> colunit_psm

◆ colunit_small_molecule

std::vector<std::string> colunit_small_molecule

◆ contact

std::map<Size, MzTabContactMetaData> contact

◆ custom

std::map<Size, MzTabParameter> custom

◆ cv

std::map<Size, MzTabCVMetaData> cv

◆ description

MzTabString description

◆ false_discovery_rate

MzTabParameterList false_discovery_rate

◆ fixed_mod

std::map<Size, MzTabModificationMetaData> fixed_mod

◆ instrument

std::map<Size, MzTabInstrumentMetaData> instrument

◆ ms_run

std::map<Size, MzTabMSRunMetaData> ms_run

◆ mz_tab_id

MzTabString mz_tab_id

◆ mz_tab_mode

MzTabString mz_tab_mode

◆ mz_tab_type

MzTabString mz_tab_type

◆ mz_tab_version

MzTabString mz_tab_version

◆ nucleic_acid_search_engine_score

std::map<Size, MzTabParameter> nucleic_acid_search_engine_score

◆ oligonucleotide_search_engine_score

std::map<Size, MzTabParameter> oligonucleotide_search_engine_score

◆ osm_search_engine_score

std::map<Size, MzTabParameter> osm_search_engine_score

◆ peptide_quantification_unit

MzTabParameter peptide_quantification_unit

◆ peptide_search_engine_score

std::map<Size, MzTabParameter> peptide_search_engine_score

◆ protein_quantification_unit

MzTabParameter protein_quantification_unit

◆ protein_search_engine_score

std::map<Size, MzTabParameter> protein_search_engine_score

◆ psm_search_engine_score

std::map<Size, MzTabParameter> psm_search_engine_score

◆ publication

std::map<Size, MzTabString> publication

◆ quantification_method

MzTabParameter quantification_method

◆ sample

std::map<Size, MzTabSampleMetaData> sample

◆ sample_processing

std::map<Size, MzTabParameterList> sample_processing

◆ small_molecule_quantification_unit

MzTabParameter small_molecule_quantification_unit

◆ smallmolecule_search_engine_score

std::map<Size, MzTabParameter> smallmolecule_search_engine_score

◆ software

std::map<Size, MzTabSoftwareMetaData> software

◆ study_variable

std::map<Size, MzTabStudyVariableMetaData> study_variable

◆ title

MzTabString title

◆ uri

std::map<Size, MzTabString> uri

◆ variable_mod

std::map<Size, MzTabModificationMetaData> variable_mod

Public Member Functions

Public Attributes