OSWProtein Class Reference

A Protein is the highest entity and contains one or more peptides which were found/traced. More...

#include <OpenMS/DATASTRUCTURES/OSWData.h>

Collaboration diagram for OSWProtein:

Public Member Functions
	OSWProtein ()=default
	just a dummy feature to allow for acceptor output values etc
	OSWProtein (const std::string &accession, const Size id, std::vector< OSWPeptidePrecursor > &&peptides)
	custom c'tor which fills all the members with data; all members are read-only
	OSWProtein (const OSWProtein &rhs)=default
	Copy c'tor.
OSWProtein &	operator= (const OSWProtein &rhs)=default
	assignment operator
	OSWProtein (OSWProtein &&rhs)=default
	move c'tor
OSWProtein &	operator= (OSWProtein &&rhs)=default
	move assignment operator
const std::string &	getAccession () const
	Protein accession (UniProt-style identifier supplied at construction).
Size	getID () const
	Protein ID as recorded by the OSW file (the PROTEIN_ID column in the sqlite schema).
const std::vector< OSWPeptidePrecursor > &	getPeptidePrecursors () const
	Charged peptide precursors that map to this protein.

Private Attributes
std::string	accession_
Size	id_
std::vector< OSWPeptidePrecursor >	peptides_

Detailed Description

A Protein is the highest entity and contains one or more peptides which were found/traced.

Constructor & Destructor Documentation

OSWProtein() [1/4]

OSWProtein ( )

default

just a dummy feature to allow for acceptor output values etc

OSWProtein() [2/4]

OSWProtein	(	const std::string &	accession,
		const Size	id,
		std::vector< OSWPeptidePrecursor > &&	peptides
	)

custom c'tor which fills all the members with data; all members are read-only

OSWProtein() [3/4]

OSWProtein ( const OSWProtein &  rhs )

default

Copy c'tor.

OSWProtein() [4/4]

OSWProtein ( OSWProtein &&  rhs )

default

move c'tor

Member Function Documentation

getAccession()

const std::string & getAccession ( ) const

inline

Protein accession (UniProt-style identifier supplied at construction).

getID()

Size getID ( ) const

inline

Protein ID as recorded by the OSW file (the PROTEIN_ID column in the sqlite schema).

getPeptidePrecursors()

const std::vector< OSWPeptidePrecursor > & getPeptidePrecursors ( ) const

inline

Charged peptide precursors that map to this protein.

operator=() [1/2]

OSWProtein & operator= ( const OSWProtein &  rhs )

default

assignment operator

operator=() [2/2]

OSWProtein & operator= ( OSWProtein &&  rhs )

default

move assignment operator

Member Data Documentation

accession_

std::string accession_

private

id_

Size id_

private

peptides_

std::vector<OSWPeptidePrecursor> peptides_

private