Functions
You can set more CMake variables adding< code > linking and adding include directories</td ></tr >< tr >< th valign="top"> CMAKE_PREFIX_PATH</td >< td > Additional search path for the contrib libraries[MacOSX only] If you want to use libraries installed via Homebrew or MacPorts you might need to provide the corresponding paths< code > e g< code > this flag can be used to disable those parts of the documentation and the tests that need an X	Server (Default:On)</td ></tr >< tr >< th valign

if none is it is fetched and built automatically from source via CMake FetchContent Affects and	ProteomicsLFQ (Default:On)</td ></tr >< tr >< th valign

Variables
You can set more CMake variables adding< code >	DVARIABLE

You can set more CMake variables adding< code > linking and adding include directories</td ></tr >< tr >< th valign="top"> CMAKE_PREFIX_PATH</td >< td > Additional search path for the contrib libraries[MacOSX only] If you want to use libraries installed via Homebrew or MacPorts you might need to provide the corresponding paths< code >	DCMAKE_PREFIX_PATH

You can set more CMake variables adding< code > linking and adding include directories</td ></tr >< tr >< th valign="top"> CMAKE_PREFIX_PATH</td >< td > Additional search path for the contrib libraries[MacOSX only] If you want to use libraries installed via Homebrew or MacPorts you might need to provide the corresponding paths< code > e g< code >	C

if none is	found

if none is it is fetched and built automatically from source via CMake FetchContent Affects	FileConverter

if none is it is fetched and built automatically from source via CMake FetchContent Affects	PeakPickerIM

if none is it is fetched and built automatically from source via CMake FetchContent Affects	OpenSwathWorkflow

if none is it is fetched and built automatically from source via CMake FetchContent Affects	CometAdapter

Function Documentation

◆ ProteomicsLFQ()

if none is it is fetched and built automatically from source via CMake FetchContent Affects and ProteomicsLFQ ( Default:On )

◆ Server()

You can set more CMake variables adding< code > linking and adding include directories</td ></tr >< tr >< th valign="top"> CMAKE_PREFIX_PATH</td >< td > Additional search path for the contrib libraries[MacOSX only] If you want to use libraries installed via Homebrew or MacPorts you might need to provide the corresponding paths< code > e g< code > this flag can be used to disable those parts of the documentation and the tests that need an X Server ( Default:On )

Variable Documentation

◆ C

You can set more CMake variables adding<code> linking and adding include directories</td></tr><tr><th valign="top"> CMAKE_PREFIX_PATH</td><td> Additional search path for the contrib libraries [MacOSX only] If you want to use libraries installed via Homebrew or MacPorts you might need to provide the corresponding paths<code> e g<code> C

◆ CometAdapter

if none is it is fetched and built automatically from source via CMake FetchContent Affects CometAdapter

◆ DCMAKE_PREFIX_PATH

You can set more CMake variables adding<code> linking and adding include directories</td></tr><tr><th valign="top"> CMAKE_PREFIX_PATH</td><td> Additional search path for the contrib libraries [MacOSX only] If you want to use libraries installed via Homebrew or MacPorts you might need to provide the corresponding paths<code> DCMAKE_PREFIX_PATH

Initial value:

=/usr/local/Cellar</code> for Homebrew
    <code>-DCMAKE_PREFIX_PATH=/opt/local</code> for MacPorts
 
    Please keep in mind that both Homebrew and MacPorts do not provide all libraries so
    you also need to specify the path to your self-build contrib via <code>-DOPENMS_CONTRIB_LIBS</code>
    </td>
  </tr>
  <tr>
    <th valign="top">Qt6_DIR</td>
    <td>Additional search path for the Qt6 CMake files. Use <code>/PATH/TO/QT_INSTALLATION/lib/cmake/Qt6</code> as value

◆ DVARIABLE

You can set more CMake variables adding<code> DVARIABLE

Initial value:

=VALUE</code> options when calling CMake.
<br>
The most important CMake variables are:
<br>
 
<table style="border-style:solid; border-collapse:collapse; border-color:#c0c0c0;">
  <tr>
    <th valign="top">OPENMS_CONTRIB_LIBS</td>
    <td>Separate search path for the contrib libraries from github.com/OpenMS/contrib that is internally considered before
    CMAKE_PREFIX_PATH for searching

◆ FileConverter

if none is it is fetched and built automatically from source via CMake FetchContent Affects FileConverter

◆ found

if none is found

Referenced by KDTree< __K, _Val, _Acc, _Dist, _Cmp, _Alloc >::_M_find(), KDTree< __K, _Val, _Acc, _Dist, _Cmp, _Alloc >::_M_find_exact(), RangeManager< RangeBases >::assignUnsafe(), RangeManager< RangeBases >::clampToUnsafe(), FullSwathFileConsumer::consumeSpectrum(), RangeManager< RangeBases >::extendUnsafe(), IDFilter::HasMetaValue< HitType >::operator()(), IDFilter::HasMaxMetaValue< HitType >::operator()(), IDFilter::HasMinMetaValue< HitType >::operator()(), and RangeManager< RangeBases >::pushIntoUnsafe().

◆ OpenSwathWorkflow

if none is it is fetched and built automatically from source via CMake FetchContent Affects OpenSwathWorkflow

◆ PeakPickerIM

if none is it is fetched and built automatically from source via CMake FetchContent Affects PeakPickerIM

Functions

Variables