IDFilter::GetMatchingItems< HitType, Entry > Struct Template Reference

Builds a map index of data that have a String index to find matches and return the objects. More...

#include <OpenMS/FILTERING/ID/IDFilter.h>

Inheritance diagram for IDFilter::GetMatchingItems< HitType, Entry >:

Collaboration diagram for IDFilter::GetMatchingItems< HitType, Entry >:

Public Types
typedef HitType	argument_type
typedef std::map< String, Entry * >	ItemMap

Public Member Functions
	GetMatchingItems (std::vector< Entry > &records)
	GetMatchingItems ()
const String &	getKey (const FASTAFile::FASTAEntry &entry) const
bool	exists (const HitType &hit) const
const String &	getHitKey (const PeptideEvidence &p) const
const Entry &	getValue (const PeptideEvidence &evidence) const

Public Attributes
ItemMap	items

Detailed Description

template<class HitType, class Entry>
struct OpenMS::IDFilter::GetMatchingItems< HitType, Entry >

Builds a map index of data that have a String index to find matches and return the objects.

Note

Currently implemented for Fasta Entries and Peptide Evidences

Member Typedef Documentation

argument_type

typedef HitType argument_type

ItemMap

typedef std::map<String, Entry*> ItemMap

Constructor & Destructor Documentation

GetMatchingItems() [1/2]

GetMatchingItems ( std::vector< Entry > &  records )

inline

GetMatchingItems() [2/2]

GetMatchingItems ( )

inline

Member Function Documentation

exists()

bool exists ( const HitType &  hit ) const

inline

Referenced by IDFilter::DigestionFilter::operator()().

getHitKey()

const String& getHitKey ( const PeptideEvidence &  p ) const

inline

References PeptideEvidence::getProteinAccession().

getKey()

const String& getKey ( const FASTAFile::FASTAEntry &  entry ) const

inline

References FASTAFile::FASTAEntry::identifier.

getValue()

const Entry& getValue ( const PeptideEvidence &  evidence ) const

inline

Referenced by IDFilter::DigestionFilter::operator()().

Member Data Documentation

items

ItemMap items