ProteinIdentification::Mapping Struct Reference

two way mapping from ms-run-path to protID|pepID-identifier More...

#include <OpenMS/METADATA/ProteinIdentification.h>

Collaboration diagram for ProteinIdentification::Mapping:

Public Member Functions
	Mapping ()=default
	Mapping (const std::vector< ProteinIdentification > &prot_ids)
void	create (const std::vector< ProteinIdentification > &prot_ids)
String	getPrimaryMSRunPath (const PeptideIdentification &pepid) const

Public Attributes
std::map< String, StringList >	identifier_to_msrunpath
std::map< StringList, String >	runpath_to_identifier

Detailed Description

two way mapping from ms-run-path to protID|pepID-identifier

Constructor & Destructor Documentation

Mapping() [1/2]

Mapping ( )

default

Mapping() [2/2]

Mapping ( const std::vector< ProteinIdentification > &  prot_ids )

inlineexplicit

Member Function Documentation

create()

void create ( const std::vector< ProteinIdentification > &  prot_ids )

inline

References ListUtils::concatenate().

getPrimaryMSRunPath()

String getPrimaryMSRunPath ( const PeptideIdentification &  pepid ) const

inline

References PeptideIdentification::getIdentifier(), MetaInfoInterface::getMetaValue(), and OpenMS::Constants::UserParam::ID_MERGE_INDEX.

Member Data Documentation

identifier_to_msrunpath

std::map<String, StringList> identifier_to_msrunpath

runpath_to_identifier

std::map<StringList, String> runpath_to_identifier