ConsensusIDAlgorithmIdentity.h

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// Copyright (c) 2002-present, OpenMS Inc. -- EKU Tuebingen, ETH Zurich, and FU Berlin
// SPDX-License-Identifier: BSD-3-Clause
//
// --------------------------------------------------------------------------
// $Maintainer: Hendrik Weisser $
// $Authors: Andreas Bertsch, Marc Sturm, Sven Nahnsen, Hendrik Weisser $
// --------------------------------------------------------------------------
 
#pragma once
 
#include <OpenMS/ANALYSIS/ID/ConsensusIDAlgorithm.h>
#include <OpenMS/METADATA/PeptideIdentificationList.h>
 
namespace OpenMS
{
  class OPENMS_DLLAPI ConsensusIDAlgorithmIdentity :
    public ConsensusIDAlgorithm
  {
  protected:
    ConsensusIDAlgorithmIdentity();
 
    virtual void preprocess_(PeptideIdentificationList& ids);
 
    virtual double getAggregateScore_(std::vector<double>& scores,
                                      bool higher_better) = 0;
 
  private:
    ConsensusIDAlgorithmIdentity(const ConsensusIDAlgorithmIdentity&);
 
    ConsensusIDAlgorithmIdentity& operator=(const ConsensusIDAlgorithmIdentity&);
 
    void apply_(PeptideIdentificationList& ids,
        const std::map<String, String>& se_info,
        SequenceGrouping& results) override;
  };
 
} // namespace OpenMS