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OpenMS
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This is the complete list of members for ProForma, including all inherited members.
| canCalculateMass(const Peptidoform &pf) | ProForma | static |
| canCalculateMass(const PeptidoformIon &pfi) | ProForma | static |
| canGenerateSpectrum(const Peptidoform &pf) | ProForma | static |
| canGenerateSpectrum(const PeptidoformIon &pfi) | ProForma | static |
| ChargeState typedef | ProForma | |
| ConversionIssueType enum name | ProForma | |
| ConversionPolicy enum name | ProForma | |
| CvDatabase enum name | ProForma | |
| ErrorCode enum name | ProForma | |
| errorCodeToString(ErrorCode code) | ProForma | static |
| fromAASequence(const AASequence &seq) | ProForma | static |
| generateSpectrum(const Peptidoform &pf, int min_charge=1, int max_charge=1, const std::string &ion_types="by", bool add_losses=false, bool add_metainfo=true) | ProForma | static |
| generateSpectrum(const PeptidoformIon &pfi, int min_charge=1, int max_charge=1, const std::string &ion_types="by", bool add_losses=false, bool add_metainfo=true) | ProForma | static |
| getAASequenceConversionIssues(const Peptidoform &pf) | ProForma | static |
| getMassCalculationIssues(const Peptidoform &pf) | ProForma | static |
| getMassCalculationIssues(const PeptidoformIon &pfi) | ProForma | static |
| getMonoWeight(const Peptidoform &pf) | ProForma | static |
| getMonoWeight(const PeptidoformIon &pfi) | ProForma | static |
| getMZ(const PeptidoformIon &pfi) | ProForma | static |
| getMZ(const Peptidoform &pf, int charge) | ProForma | static |
| getSpectrumGenerationIssues(const Peptidoform &pf) | ProForma | static |
| getSpectrumGenerationIssues(const PeptidoformIon &pfi) | ProForma | static |
| GlobalModEntry typedef | ProForma | |
| isRepresentableAsAASequence(const Peptidoform &pf) | ProForma | static |
| ModificationTag typedef | ProForma | |
| parse(const String &input) | ProForma | static |
| parseIon(const String &input) | ProForma | static |
| peptidoformFromJSON(const String &json_str) | ProForma | static |
| peptidoformIonFromJSON(const String &json_str) | ProForma | static |
| resolveModifications(Peptidoform &pf) | ProForma | static |
| SequenceSection typedef | ProForma | |
| toAASequence(const Peptidoform &pf, ConversionPolicy policy=ConversionPolicy::FAIL_ON_LOSS) | ProForma | static |
| toJSON(const Peptidoform &pf) | ProForma | static |
| toJSON(const PeptidoformIon &pfi) | ProForma | static |
| toString(const Peptidoform &pf, WriteMode mode=WriteMode::LOSSLESS) | ProForma | static |
| toString(const PeptidoformIon &pfi, WriteMode mode=WriteMode::LOSSLESS) | ProForma | static |
| tryGetMonoWeight(const Peptidoform &pf) | ProForma | static |
| tryGetMonoWeight(const Peptidoform &pf, std::vector< ConversionIssue > &issues_out) | ProForma | static |
| tryGetMonoWeight(const PeptidoformIon &pfi) | ProForma | static |
| tryGetMonoWeight(const PeptidoformIon &pfi, std::vector< ConversionIssue > &issues_out) | ProForma | static |
| tryGetMZ(const Peptidoform &pf, int charge) | ProForma | static |
| tryGetMZ(const Peptidoform &pf, int charge, std::vector< ConversionIssue > &issues_out) | ProForma | static |
| tryGetMZ(const PeptidoformIon &pfi) | ProForma | static |
| tryGetMZ(const PeptidoformIon &pfi, std::vector< ConversionIssue > &issues_out) | ProForma | static |
| WriteMode enum name | ProForma |
1.9.8 