This is the complete list of members for PEFFEntry, including all inherited members.

alt_accessions	PEFFEntry
complex_variants	PEFFEntry
custom_annotations	PEFFEntry
db_unique_id	PEFFEntry
digestWithVariants(const ProteaseDigestion &digestor, std::vector< std::string > &descriptions, std::vector< AASequence > &sequences, Size min_length=6, Size max_length=40, bool include_reference=true, bool include_variants=true, bool include_modifications=false) const	PEFFEntry
disulfide_bonds	PEFFEntry
entry_id	PEFFEntry
entry_version	PEFFEntry
enumeratePEFFModifications_(const AASequence &peptide, const std::vector< std::pair< Size, const PEFFModification * > > &peff_mods, const String &base_description)	PEFFEntry	privatestatic
fromFASTAEntry(const FASTAFile::FASTAEntry &fasta)	PEFFEntry	static
gene_name	PEFFEntry
generatePeptides(const ProteaseDigestion &digestor, std::vector< std::string > &descriptions, std::vector< AASequence > &sequences, const std::vector< std::string > &fixed_mods={}, const std::vector< std::string > &variable_mods={}, Size max_variable_mods_per_peptide=2, Size min_length=6, Size max_length=40, bool include_reference=true, bool include_peff_variants=true, bool include_peff_modifications=true) const	PEFFEntry
getModifiedSequence() const	PEFFEntry
getProcessedSequence(const String &region_accession="PEFF:0001021") const	PEFFEntry
getSequence() const	PEFFEntry
getVariantSequences(std::vector< std::string > &descriptions, std::vector< AASequence > &sequences, bool include_complex=false) const	PEFFEntry
identifier	PEFFEntry
modifications	PEFFEntry
ncbi_tax_id	PEFFEntry
operator=(const PEFFEntry &rhs)=default	PEFFEntry
operator=(PEFFEntry &&rhs) noexcept=default	PEFFEntry
operator==(const PEFFEntry &rhs) const	PEFFEntry	inline
PEFFEntry()=default	PEFFEntry
PEFFEntry(const PEFFEntry &rhs)=default	PEFFEntry
PEFFEntry(PEFFEntry &&rhs) noexcept=default	PEFFEntry
prefix	PEFFEntry
processed_regions	PEFFEntry
protein_existence	PEFFEntry
protein_names	PEFFEntry
proteoforms	PEFFEntry
sequence	PEFFEntry
sequence_length	PEFFEntry
sequence_version	PEFFEntry
simple_variants	PEFFEntry
taxonomy_name	PEFFEntry
toFASTAEntry() const	PEFFEntry