Home  · Classes  · Annotated Classes  · Modules  · Members  · Namespaces  · Related Pages
CVMappingRule.h
Go to the documentation of this file.
1 // --------------------------------------------------------------------------
2 // OpenMS -- Open-Source Mass Spectrometry
3 // --------------------------------------------------------------------------
4 // Copyright The OpenMS Team -- Eberhard Karls University Tuebingen,
5 // ETH Zurich, and Freie Universitaet Berlin 2002-2017.
6 //
7 // This software is released under a three-clause BSD license:
8 // * Redistributions of source code must retain the above copyright
9 // notice, this list of conditions and the following disclaimer.
10 // * Redistributions in binary form must reproduce the above copyright
11 // notice, this list of conditions and the following disclaimer in the
12 // documentation and/or other materials provided with the distribution.
13 // * Neither the name of any author or any participating institution
14 // may be used to endorse or promote products derived from this software
15 // without specific prior written permission.
16 // For a full list of authors, refer to the file AUTHORS.
17 // --------------------------------------------------------------------------
18 // THIS SOFTWARE IS PROVIDED BY THE COPYRIGHT HOLDERS AND CONTRIBUTORS "AS IS"
19 // AND ANY EXPRESS OR IMPLIED WARRANTIES, INCLUDING, BUT NOT LIMITED TO, THE
20 // IMPLIED WARRANTIES OF MERCHANTABILITY AND FITNESS FOR A PARTICULAR PURPOSE
21 // ARE DISCLAIMED. IN NO EVENT SHALL ANY OF THE AUTHORS OR THE CONTRIBUTING
22 // INSTITUTIONS BE LIABLE FOR ANY DIRECT, INDIRECT, INCIDENTAL, SPECIAL,
23 // EXEMPLARY, OR CONSEQUENTIAL DAMAGES (INCLUDING, BUT NOT LIMITED TO,
24 // PROCUREMENT OF SUBSTITUTE GOODS OR SERVICES; LOSS OF USE, DATA, OR PROFITS;
25 // OR BUSINESS INTERRUPTION) HOWEVER CAUSED AND ON ANY THEORY OF LIABILITY,
26 // WHETHER IN CONTRACT, STRICT LIABILITY, OR TORT (INCLUDING NEGLIGENCE OR
27 // OTHERWISE) ARISING IN ANY WAY OUT OF THE USE OF THIS SOFTWARE, EVEN IF
28 // ADVISED OF THE POSSIBILITY OF SUCH DAMAGE.
29 //
30 // --------------------------------------------------------------------------
31 // $Maintainer: Timo Sachsenberg $
32 // $Authors: Andreas Bertsch $
33 // --------------------------------------------------------------------------
34 
35 #ifndef OPENMS_DATASTRUCTURES_CVMAPPINGRULE_H
36 #define OPENMS_DATASTRUCTURES_CVMAPPINGRULE_H
37 
38 #include <OpenMS/OpenMSConfig.h>
40 
41 #include <vector>
42 
43 namespace OpenMS
44 {
45  class CVMappingTerm;
46 
54  class OPENMS_DLLAPI CVMappingRule
55  {
56 public:
57 
60  {
61  MUST = 0,
62  SHOULD = 1,
63  MAY = 2
64  };
65 
68  {
69  OR = 0,
70  AND = 1,
71  XOR = 2
72  };
73 
75  CVMappingRule();
76 
78  CVMappingRule(const CVMappingRule& rhs);
79 
81  virtual ~CVMappingRule();
82 
84  CVMappingRule& operator=(const CVMappingRule& rhs);
85 
89  void setIdentifier(const String& identifier);
91 
93  const String& getIdentifier() const;
94 
96  void setElementPath(const String& element_path);
97 
99  const String& getElementPath() const;
100 
102  void setRequirementLevel(RequirementLevel level);
103 
105  RequirementLevel getRequirementLevel() const;
106 
108  void setCombinationsLogic(CombinationsLogic combinations_logic);
109 
111  CombinationsLogic getCombinationsLogic() const;
112 
114  void setScopePath(const String& path);
115 
117  const String& getScopePath() const;
118 
120  void setCVTerms(const std::vector<CVMappingTerm>& cv_terms);
121 
123  const std::vector<CVMappingTerm>& getCVTerms() const;
124 
126  void addCVTerm(const CVMappingTerm& cv_terms);
128 
132  bool operator==(const CVMappingRule& rhs) const;
134 
136  bool operator!=(const CVMappingRule& rhs) const;
138 
139 protected:
140 
142 
144 
146 
148 
150 
151  std::vector<CVMappingTerm> cv_terms_;
152  };
153 
154 } // namespace OpenMS
155 
156 #endif // OPENMS_DATASTRUCTURES_CVMAPPINGRULE_H
A more convenient string class.
Definition: String.h:57
String scope_path_
Definition: CVMappingRule.h:147
CombinationsLogic
enum to specify the combination operator
Definition: CVMappingRule.h:67
std::vector< CVMappingTerm > cv_terms_
Definition: CVMappingRule.h:151
bool operator==(_Iterator< _Val, _Ref, _Ptr > const &, _Iterator< _Val, _Ref, _Ptr > const &)
Definition: KDTree.h:806
Main OpenMS namespace.
Definition: FeatureDeconvolution.h:47
Representation of controlled vocabulary term.
Definition: CVMappingTerm.h:51
RequirementLevel requirement_level_
Definition: CVMappingRule.h:145
Representation of a CV Mapping rule used by CVMappings.
Definition: CVMappingRule.h:54
bool operator!=(_Iterator< _Val, _Ref, _Ptr > const &, _Iterator< _Val, _Ref, _Ptr > const &)
Definition: KDTree.h:824
String identifier_
Definition: CVMappingRule.h:141
CombinationsLogic combinations_logic_
Definition: CVMappingRule.h:149
RequirementLevel
enum to specify the requirement level
Definition: CVMappingRule.h:59
String element_path_
Definition: CVMappingRule.h:143

OpenMS / TOPP release 2.3.0 Documentation generated on Tue Jan 9 2018 18:21:59 using doxygen 1.8.13