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CompleteLinkage.h
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35 #ifndef OPENMS_COMPARISON_CLUSTERING_COMPLETELINKAGE_H
36 #define OPENMS_COMPARISON_CLUSTERING_COMPLETELINKAGE_H
37 
38 #include <vector>
39 #include <set>
40 #include <cmath>
41 
45 
46 namespace OpenMS
47 {
58  class OPENMS_DLLAPI CompleteLinkage :
59  public ClusterFunctor, public ProgressLogger
60  {
61 public:
62 
65 
67  CompleteLinkage(const CompleteLinkage & source);
68 
70  virtual ~CompleteLinkage();
71 
73  CompleteLinkage & operator=(const CompleteLinkage & source);
74 
85  void operator()(DistanceMatrix<float> & original_distance, std::vector<BinaryTreeNode> & cluster_tree, const float threshold = 1) const;
86 
88  static ClusterFunctor * create();
89 
91  static const String getProductName();
92 
93  };
94 
95 }
96 #endif //OPENMS_COMPARISON_CLUSTERING_COMPLETELINKAGE_H
A more convenient string class.
Definition: String.h:57
A two-dimensional distance matrix, similar to OpenMS::Matrix.
Definition: DistanceMatrix.h:68
Main OpenMS namespace.
Definition: FeatureDeconvolution.h:47
Base class for all classes that want to report their progress.
Definition: ProgressLogger.h:55
CompleteLinkage ClusterMethod.
Definition: CompleteLinkage.h:58
Base class for cluster functors.
Definition: ClusterFunctor.h:54

OpenMS / TOPP release 2.3.0 Documentation generated on Tue Jan 9 2018 18:21:59 using doxygen 1.8.13