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InstrumentSettings.h
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34 
35 #ifndef OPENMS_METADATA_INSTRUMENTSETTINGS_H
36 #define OPENMS_METADATA_INSTRUMENTSETTINGS_H
37 
40 
41 namespace OpenMS
42 {
48  class OPENMS_DLLAPI InstrumentSettings :
49  public MetaInfoInterface
50  {
51 public:
53  enum ScanMode
54  {
59  SIM,
60  SRM,
61  CRM,
62  CNG,
63  CNL,
65  EMC,
66  TDF,
67  EMR,
70  SIZE_OF_SCANMODE
71  };
72 
74  static const std::string NamesOfScanMode[SIZE_OF_SCANMODE];
75 
79  InstrumentSettings(const InstrumentSettings & source);
82 
84  InstrumentSettings & operator=(const InstrumentSettings & source);
85 
87  bool operator==(const InstrumentSettings & rhs) const;
89  bool operator!=(const InstrumentSettings & rhs) const;
90 
92  ScanMode getScanMode() const;
94  void setScanMode(ScanMode scan_mode);
95 
97  bool getZoomScan() const;
99  void setZoomScan(bool zoom_scan);
100 
102  IonSource::Polarity getPolarity() const;
104  void setPolarity(IonSource::Polarity polarity);
105 
107  const std::vector<ScanWindow> & getScanWindows() const;
109  std::vector<ScanWindow> & getScanWindows();
111  void setScanWindows(std::vector<ScanWindow> scan_windows);
112 
113 protected:
117  std::vector<ScanWindow> scan_windows_;
118  };
119 } // namespace OpenMS
120 
121 #endif // OPENMS_METADATA_INSTRUMENTSETTINGS_H
Description of the settings a MS Instrument was run with.
Definition: InstrumentSettings.h:48
Enhanced multiply charged scan.
Definition: InstrumentSettings.h:65
IonSource::Polarity polarity_
Definition: InstrumentSettings.h:116
bool operator==(_Iterator< _Val, _Ref, _Ptr > const &, _Iterator< _Val, _Ref, _Ptr > const &)
Definition: KDTree.h:806
ScanMode scan_mode_
Definition: InstrumentSettings.h:114
Main OpenMS namespace.
Definition: FeatureDeconvolution.h:47
MS2+ mass spectrum, is a "mass spectrum".
Definition: InstrumentSettings.h:58
Selected reaction monitoring scan Synonyms: &#39;Multiple reaction monitoring scan&#39;, &#39;SRM scan&#39;, &#39;MRM scan&#39;.
Definition: InstrumentSettings.h:60
bool zoom_scan_
Definition: InstrumentSettings.h:115
Electromagnetic radiation scan Synonyms: &#39;EMR spectrum&#39;.
Definition: InstrumentSettings.h:67
Absorption scan.
Definition: InstrumentSettings.h:69
full scan mass spectrum, is a "mass spectrum" Synonyms: &#39;full spectrum&#39;, &#39;Q1 spectrum&#39;, &#39;Q3 spectrum&#39;, &#39;Single-Stage Mass Spectrometry&#39;
Definition: InstrumentSettings.h:57
Emission scan.
Definition: InstrumentSettings.h:68
Selected ion monitoring scan Synonyms: &#39;Multiple ion monitoring scan&#39;, &#39;SIM scan&#39;, &#39;MIM scan&#39;.
Definition: InstrumentSettings.h:59
Constant neutral loss scan Synonyms: &#39;CNG scan&#39;.
Definition: InstrumentSettings.h:63
Time-delayed fragmentation scan.
Definition: InstrumentSettings.h:66
Interface for classes that can store arbitrary meta information (Type-Name-Value tuples).
Definition: MetaInfoInterface.h:56
std::vector< ScanWindow > scan_windows_
Definition: InstrumentSettings.h:117
Consecutive reaction monitoring scan Synonyms: &#39;CRM scan&#39;.
Definition: InstrumentSettings.h:61
bool operator!=(_Iterator< _Val, _Ref, _Ptr > const &, _Iterator< _Val, _Ref, _Ptr > const &)
Definition: KDTree.h:824
ScanMode
scan mode
Definition: InstrumentSettings.h:53
Unknown scan method.
Definition: InstrumentSettings.h:55
Precursor ion scan.
Definition: InstrumentSettings.h:64
general spectrum type
Definition: InstrumentSettings.h:56
Constant neutral gain scan Synonyms: &#39;CNG scan&#39;.
Definition: InstrumentSettings.h:62
Polarity
Polarity of the ion source.
Definition: IonSource.h:140

OpenMS / TOPP release 2.3.0 Documentation generated on Tue Jan 9 2018 18:22:01 using doxygen 1.8.13