MzIdentMLDOMHandler.h File Reference

#include <OpenMS/KERNEL/StandardTypes.h>
#include <OpenMS/FORMAT/ControlledVocabulary.h>
#include <OpenMS/METADATA/ProteinHit.h>
#include <OpenMS/CHEMISTRY/AASequence.h>
#include <OpenMS/CONCEPT/UniqueIdGenerator.h>
#include <OpenMS/METADATA/ProteinIdentification.h>
#include <OpenMS/METADATA/PeptideIdentification.h>
#include <OpenMS/CONCEPT/LogStream.h>
#include <OpenMS/METADATA/CVTermList.h>
#include <xercesc/dom/DOM.hpp>
#include <xercesc/dom/DOMDocument.hpp>
#include <xercesc/dom/DOMDocumentType.hpp>
#include <xercesc/dom/DOMElement.hpp>
#include <xercesc/dom/DOMImplementation.hpp>
#include <xercesc/dom/DOMImplementationLS.hpp>
#include <xercesc/dom/DOMNodeIterator.hpp>
#include <xercesc/dom/DOMNodeList.hpp>
#include <xercesc/dom/DOMText.hpp>
#include <xercesc/util/OutOfMemoryException.hpp>
#include <xercesc/util/XMLString.hpp>
#include <xercesc/util/PlatformUtils.hpp>
#include <xercesc/framework/LocalFileFormatTarget.hpp>
#include <xercesc/parsers/XercesDOMParser.hpp>
#include <xercesc/util/XMLUni.hpp>
#include <xercesc//framework/psvi/XSValue.hpp>
#include <string>
#include <stdexcept>
#include <vector>
#include <map>

Go to the source code of this file.

Classes
class	MzIdentMLDOMHandler
	XML DOM handler for MzIdentMLFile. More...
struct	MzIdentMLDOMHandler::AnalysisSoftware
	Struct to hold the used analysis software for that file. More...
struct	MzIdentMLDOMHandler::PeptideEvidence
	Struct to hold the PeptideEvidence information. More...
struct	MzIdentMLDOMHandler::DBSequence
	Struct to hold the information from the DBSequence xml tag. More...
struct	MzIdentMLDOMHandler::SpectrumIdentification
	Struct to hold the information from the SpectrumIdentification xml tag. More...
struct	MzIdentMLDOMHandler::ModificationParam
	Struct to hold the information from the ModificationParam xml tag. More...
struct	MzIdentMLDOMHandler::SpectrumIdentificationProtocol
	Struct to hold the information from the SpectrumIdentificationProtocol xml tag. More...
struct	MzIdentMLDOMHandler::DatabaseInput
	Struct to hold the information from the DatabaseInput xml tag. More...

Namespaces
	OpenMS
	Main OpenMS namespace.
	OpenMS::Internal
	Namespace used to hide implementation details from users.