ProteinIdentificationVisualizer.h

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// --------------------------------------------------------------------------
//                   OpenMS -- Open-Source Mass Spectrometry
// --------------------------------------------------------------------------
// Copyright The OpenMS Team -- Eberhard Karls University Tuebingen,
// ETH Zurich, and Freie Universitaet Berlin 2002-2017.
//
// This software is released under a three-clause BSD license:
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//    may be used to endorse or promote products derived from this software
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// $Maintainer: Timo Sachsenberg $
// $Authors: Marc Sturm $
// --------------------------------------------------------------------------

#ifndef OPENMS_VISUAL_VISUALIZER_PROTEINIDENTIFICATIONVISUALIZER_H
#define OPENMS_VISUAL_VISUALIZER_PROTEINIDENTIFICATIONVISUALIZER_H

// OpenMS_GUI config
#include <OpenMS/VISUAL/OpenMS_GUIConfig.h>

//OpenMS
#include <OpenMS/METADATA/ProteinIdentification.h>
#include <OpenMS/VISUAL/VISUALIZER/BaseVisualizer.h>
#include <OpenMS/VISUAL/VISUALIZER/BaseVisualizerGUI.h>

namespace OpenMS
{
  class MetaDataBrowser;

  class OPENMS_GUI_DLLAPI ProteinIdentificationVisualizer :
    public BaseVisualizerGUI,
    public BaseVisualizer<ProteinIdentification>
  {
    Q_OBJECT

public:
    ProteinIdentificationVisualizer(bool editable = FALSE, QWidget * parent = 0, MetaDataBrowser * caller = 0);

    void load(ProteinIdentification & s, int tree_item_id);

public slots:

    //Docu in base class
    void store();

protected slots:

    void updateTree_();

    void undo_();

protected:

    MetaDataBrowser * pidv_caller_;
    int tree_id_;


    QLineEdit * engine_;
    QLineEdit * engine_version_;
    QLineEdit * identification_date_;
    QLineEdit * identification_threshold_;
    QLineEdit * identifier_;
    QLineEdit * score_type_;
    QComboBox * higher_better_;

    QLineEdit * db_;
    QLineEdit * db_version_;
    QLineEdit * taxonomy_;
    QLineEdit * charges_;
    QLineEdit * missed_cleavages_;
    QLineEdit * peak_tolerance_;
    QLineEdit * precursor_tolerance_;
    QComboBox * mass_type_;
    QLineEdit * enzyme_;

    QLineEdit * filter_threshold_;
  };
}
#endif //OPENMS_VISUAL_VISUALIZER_PROTEINIDENTIFICATIONVISUALIZER_H