35 #ifndef OPENMS_ANALYSIS_OPENSWATH_DATAACCESS_SPECTRUMACCESSOPENMSINMEMORY_H 36 #define OPENMS_ANALYSIS_OPENSWATH_DATAACCESS_SPECTRUMACCESSOPENMSINMEMORY_H 45 #include <boost/shared_ptr.hpp> 93 boost::shared_ptr<OpenSwath::ISpectrumAccess> lightClone()
const;
99 std::vector<std::size_t> getSpectraByRT(
double RT,
double deltaRT)
const;
101 size_t getNrSpectra()
const;
105 size_t getNrChromatograms()
const;
107 std::string getChromatogramNativeID(
int id)
const;
121 #endif // OPENMS_ANALYSIS_OPENSWATH_DATAACCESS_SPECTRUMACCESSOPENMSINMEMORY_H
The representation of a chromatogram.
Definition: MSChromatogram.h:55
std::vector< OpenSwath::ChromatogramPtr > chromatograms_
Definition: SpectrumAccessOpenMSInMemory.h:114
std::vector< OpenSwath::SpectrumMeta > spectra_meta_
Definition: SpectrumAccessOpenMSInMemory.h:112
boost::shared_ptr< Spectrum > SpectrumPtr
Definition: openswathalgo/include/OpenMS/ANALYSIS/OPENSWATH/OPENSWATHALGO/DATAACCESS/DataStructures.h:244
Main OpenMS namespace.
Definition: FeatureDeconvolution.h:47
The representation of a 1D spectrum.
Definition: MSSpectrum.h:67
boost::shared_ptr< Chromatogram > ChromatogramPtr
Definition: openswathalgo/include/OpenMS/ANALYSIS/OPENSWATH/OPENSWATHALGO/DATAACCESS/DataStructures.h:156
OpenMS::MSSpectrum MSSpectrumType
Definition: SpectrumAccessOpenMSInMemory.h:80
In-Memory representation of a mass spectrometry experiment.
Definition: MSExperiment.h:82
OpenMS::PeakMap MSExperimentType
Definition: SpectrumAccessOpenMSInMemory.h:79
An implementation of the OpenSWATH Spectrum Access interface completely in memory.
Definition: SpectrumAccessOpenMSInMemory.h:75
The interface of a mass spectrometry experiment.
Definition: openswathalgo/include/OpenMS/ANALYSIS/OPENSWATH/OPENSWATHALGO/DATAACCESS/ISpectrumAccess.h:51
std::vector< std::string > chromatogram_ids_
Definition: SpectrumAccessOpenMSInMemory.h:115
std::vector< OpenSwath::SpectrumPtr > spectra_
Definition: SpectrumAccessOpenMSInMemory.h:111
OpenMS::MSChromatogram MSChromatogramType
Definition: SpectrumAccessOpenMSInMemory.h:81