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TransformationEvaluation

Applies a transformation to a range of values and records the results.

This is useful for plotting transformations for quality assessment etc.

The command line parameters of this tool are:

TransformationEvaluation -- Applies a transformation to a range of values
Version: 2.3.0 Jan  9 2018, 17:46:23, Revision: 38ae115

Usage:
  TransformationEvaluation <options>

Options (mandatory options marked with '*'):
  -in <file>*        Input file containing the transformation description (valid formats: 'trafoXML')
  -out <file>        Output file containing original and transformed values; if empty, output is written to 
                     the screen (valid formats: 'trafoXML')
  -min <value>       Minimum value to transform (default: '0')
  -max <value>       Maximum value to transform (if at or below 'min', select a suitable maximum based on 
                     the transformation description) (default: '0')
  -step <value>      Step size between 'min' and 'max' (default: '1' min: '0.001')
                     
Common UTIL options:
  -ini <file>        Use the given TOPP INI file
  -threads <n>       Sets the number of threads allowed to be used by the TOPP tool (default: '1')
  -write_ini <file>  Writes the default configuration file
  --help             Shows options
  --helphelp         Shows all options (including advanced)

INI file documentation of this tool:

Legend:
required parameter
advanced parameter
+TransformationEvaluationApplies a transformation to a range of values
version2.3.0 Version of the tool that generated this parameters file.
++1Instance '1' section for 'TransformationEvaluation'
in Input file containing the transformation descriptioninput file*.trafoXML
out Output file containing original and transformed values; if empty, output is written to the screenoutput file*.trafoXML
min0 Minimum value to transform
max0 Maximum value to transform (if at or below 'min', select a suitable maximum based on the transformation description)
step1 Step size between 'min' and 'max'0.001:∞
log Name of log file (created only when specified)
debug0 Sets the debug level
threads1 Sets the number of threads allowed to be used by the TOPP tool
no_progressfalse Disables progress logging to command linetrue,false
forcefalse Overwrite tool specific checks.true,false
testfalse Enables the test mode (needed for internal use only)true,false

OpenMS / TOPP release 2.3.0 Documentation generated on Tue Jan 9 2018 18:22:06 using doxygen 1.8.13