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MRMTransitionGroupPicker Member List

This is the complete list of members for MRMTransitionGroupPicker, including all inherited members.

background_subtraction_MRMTransitionGroupPickerprotected
calculateBgEstimation_(const MSChromatogram &chromatogram, double best_left, double best_right, double &background, double &avg_noise_level)MRMTransitionGroupPickerprotected
check_defaults_DefaultParamHandlerprotected
compute_peak_quality_MRMTransitionGroupPickerprotected
computeQuality_(MRMTransitionGroup< SpectrumT, TransitionT > &transition_group, std::vector< SpectrumT > &picked_chroms, const int chr_idx, const double best_left, const double best_right, String &outlier)MRMTransitionGroupPickerinlineprotected
createMRMFeature(MRMTransitionGroup< SpectrumT, TransitionT > &transition_group, std::vector< SpectrumT > &picked_chroms, const int chr_idx, const int peak_idx)MRMTransitionGroupPickerinline
DefaultParamHandler(const String &name)DefaultParamHandler
DefaultParamHandler(const DefaultParamHandler &rhs)DefaultParamHandler
defaults_DefaultParamHandlerprotected
defaultsToParam_()DefaultParamHandlerprotected
error_name_DefaultParamHandlerprotected
findLargestPeak(std::vector< MSChromatogram > &picked_chroms, int &chr_idx, int &peak_idx)MRMTransitionGroupPicker
getDefaults() constDefaultParamHandler
getName() constDefaultParamHandler
getParameters() constDefaultParamHandler
getSubsections() constDefaultParamHandler
min_peak_width_MRMTransitionGroupPickerprotected
min_qual_MRMTransitionGroupPickerprotected
MRMTransitionGroupPicker()MRMTransitionGroupPicker
operator=(const MRMTransitionGroupPicker &rhs)MRMTransitionGroupPickerprotected
OpenMS::DefaultParamHandler::operator=(const DefaultParamHandler &rhs)DefaultParamHandlervirtual
operator==(const DefaultParamHandler &rhs) constDefaultParamHandlervirtual
param_DefaultParamHandlerprotected
pickTransitionGroup(MRMTransitionGroup< SpectrumT, TransitionT > &transition_group)MRMTransitionGroupPickerinline
prepareMasterContainer_(const SpectrumT &ref_chromatogram, SpectrumT &master_peak_container, double left_boundary, double right_boundary)MRMTransitionGroupPickerinlineprotected
recalculate_peaks_MRMTransitionGroupPickerprotected
recalculate_peaks_max_z_MRMTransitionGroupPickerprotected
recalculatePeakBorders_(std::vector< SpectrumT > &picked_chroms, double &best_left, double &best_right, double max_z)MRMTransitionGroupPickerinlineprotected
remove_overlapping_features(std::vector< SpectrumT > &picked_chroms, double best_left, double best_right)MRMTransitionGroupPickerinline
resample_boundary_MRMTransitionGroupPickerprotected
resampleChromatogram_(const SpectrumT &chromatogram, const SpectrumT &master_peak_container, double left_boundary, double right_boundary)MRMTransitionGroupPickerinlineprotected
selectChromHelper_(MRMTransitionGroup< SpectrumT, TransitionT > &transition_group, String native_id)MRMTransitionGroupPickerinlineprotected
setName(const String &name)DefaultParamHandler
setParameters(const Param &param)DefaultParamHandler
stop_after_feature_MRMTransitionGroupPickerprotected
stop_after_intensity_ratio_MRMTransitionGroupPickerprotected
subsections_DefaultParamHandlerprotected
updateMembers_()MRMTransitionGroupPickerprotectedvirtual
use_precursors_MRMTransitionGroupPickerprotected
warn_empty_defaults_DefaultParamHandlerprotected
~DefaultParamHandler()DefaultParamHandlervirtual
~MRMTransitionGroupPicker()MRMTransitionGroupPicker

OpenMS / TOPP release 2.3.0 Documentation generated on Tue Jan 9 2018 18:22:10 using doxygen 1.8.13