MSSim Member List

This is the complete list of members for MSSim, including all inherited members.

check_defaults_	DefaultParamHandler	protected
CMD enum value	ProgressLogger
consensus_map_	MSSim	private
contaminants_map_	MSSim	private
createFeatureMap_(const SimTypes::SampleProteins &peptides, SimTypes::FeatureMapSim &features, Size map_index)	MSSim	protected
current_logger_	ProgressLogger	mutableprotected
DefaultParamHandler(const String &name)	DefaultParamHandler
DefaultParamHandler(const DefaultParamHandler &rhs)	DefaultParamHandler
defaults_	DefaultParamHandler	protected
defaultsToParam_()	DefaultParamHandler	protected
endProgress() const	ProgressLogger
error_name_	DefaultParamHandler	protected
experiment_	MSSim	private
feature_maps_	MSSim	private
getChargeConsensus()	MSSim
getContaminants() const	MSSim
getDefaults() const	DefaultParamHandler
getExperiment() const	MSSim
getFeatureIdentifications(std::vector< ProteinIdentification > &proteins, std::vector< PeptideIdentification > &peptides) const	MSSim
getIdentifications(std::vector< ProteinIdentification > &proteins, std::vector< PeptideIdentification > &peptides) const	MSSim
getLabelingConsensus()	MSSim
getLogType() const	ProgressLogger
getMS2Identifications(std::vector< ProteinIdentification > &proteins, std::vector< PeptideIdentification > &peptides) const	MSSim
getName() const	DefaultParamHandler
getParameters() const	MSSim
getPeakMap() const	MSSim
getSimulatedFeatures() const	MSSim
getSubsections() const	DefaultParamHandler
GUI enum value	ProgressLogger
labeler_	MSSim	private
last_invoke_	ProgressLogger	mutableprotected
LogType enum name	ProgressLogger
logTypeToFactoryName_(LogType type)	ProgressLogger	protectedstatic
MSSim()	MSSim
NONE enum value	ProgressLogger
OpenMS::operator=(const DefaultParamHandler &rhs)	DefaultParamHandler	virtual
OpenMS::ProgressLogger::operator=(const ProgressLogger &other)	ProgressLogger
operator==(const DefaultParamHandler &rhs) const	DefaultParamHandler	virtual
param_	DefaultParamHandler	protected
peak_map_	MSSim	private
ProgressLogger()	ProgressLogger
ProgressLogger(const ProgressLogger &other)	ProgressLogger
recursion_depth_	ProgressLogger	protectedstatic
setLogType(LogType type) const	ProgressLogger
setName(const String &name)	DefaultParamHandler
setParameters(const Param &param)	DefaultParamHandler
setProgress(SignedSize value) const	ProgressLogger
simulate(SimTypes::MutableSimRandomNumberGeneratorPtr rnd_gen, SimTypes::SampleChannels &peptides)	MSSim
startProgress(SignedSize begin, SignedSize end, const String &label) const	ProgressLogger
subsections_	DefaultParamHandler	protected
syncParams_(Param &p, bool to_outer)	MSSim	protected
type_	ProgressLogger	mutableprotected
updateMembers_()	MSSim	protectedvirtual
warn_empty_defaults_	DefaultParamHandler	protected
~DefaultParamHandler()	DefaultParamHandler	virtual
~MSSim()	MSSim	virtual
~ProgressLogger()	ProgressLogger