| check_defaults_ | DefaultParamHandler | protected |
| compute_F(double dot_product, double delta_D, double dot_bias) | SpectraSTSimilarityScore | |
| create() | SpectraSTSimilarityScore | inlinestatic |
| DefaultParamHandler(const String &name) | DefaultParamHandler | |
| DefaultParamHandler(const DefaultParamHandler &rhs) | DefaultParamHandler | |
| defaults_ | DefaultParamHandler | protected |
| defaultsToParam_() | DefaultParamHandler | protected |
| delta_D(double top_hit, double runner_up) | SpectraSTSimilarityScore | |
| dot_bias(const BinnedSpectrum &bin1, const BinnedSpectrum &bin2, double dot_product=-1) const | SpectraSTSimilarityScore | |
| error_name_ | DefaultParamHandler | protected |
| getDefaults() const | DefaultParamHandler | |
| getName() const | DefaultParamHandler | |
| getParameters() const | DefaultParamHandler | |
| getProductName() | SpectraSTSimilarityScore | inlinestatic |
| getSubsections() const | DefaultParamHandler | |
| operator()(const PeakSpectrum &spec1, const PeakSpectrum &spec2) const | SpectraSTSimilarityScore | virtual |
| operator()(const BinnedSpectrum &bin1, const BinnedSpectrum &bin2) const | SpectraSTSimilarityScore | |
| operator()(const PeakSpectrum &spec) const | SpectraSTSimilarityScore | virtual |
| operator=(const SpectraSTSimilarityScore &source) | SpectraSTSimilarityScore | |
| OpenMS::PeakSpectrumCompareFunctor::operator=(const PeakSpectrumCompareFunctor &source) | PeakSpectrumCompareFunctor | |
| OpenMS::DefaultParamHandler::operator=(const DefaultParamHandler &rhs) | DefaultParamHandler | virtual |
| operator==(const DefaultParamHandler &rhs) const | DefaultParamHandler | virtual |
| param_ | DefaultParamHandler | protected |
| PeakSpectrumCompareFunctor() | PeakSpectrumCompareFunctor | |
| PeakSpectrumCompareFunctor(const PeakSpectrumCompareFunctor &source) | PeakSpectrumCompareFunctor | |
| preprocess(PeakSpectrum &spec, float remove_peak_intensity_threshold=2.01, UInt cut_peaks_below=1000, Size min_peak_number=5, Size max_peak_number=150) | SpectraSTSimilarityScore | |
| registerChildren() | PeakSpectrumCompareFunctor | static |
| setName(const String &name) | DefaultParamHandler | |
| setParameters(const Param ¶m) | DefaultParamHandler | |
| SpectraSTSimilarityScore() | SpectraSTSimilarityScore | |
| SpectraSTSimilarityScore(const SpectraSTSimilarityScore &source) | SpectraSTSimilarityScore | |
| subsections_ | DefaultParamHandler | protected |
| transform(const PeakSpectrum &spec) | SpectraSTSimilarityScore | |
| updateMembers_() | DefaultParamHandler | protectedvirtual |
| warn_empty_defaults_ | DefaultParamHandler | protected |
| ~DefaultParamHandler() | DefaultParamHandler | virtual |
| ~PeakSpectrumCompareFunctor() | PeakSpectrumCompareFunctor | virtual |
| ~SpectraSTSimilarityScore() | SpectraSTSimilarityScore | virtual |