check_defaults_ | DefaultParamHandler | protected |
CMD enum value | ProgressLogger | |
convertPQPToTargetedExperiment(const char *filename, OpenMS::TargetedExperiment &targeted_exp, bool legacy_traml_id=false) | TransitionPQPReader | |
convertPQPToTargetedExperiment(const char *filename, OpenSwath::LightTargetedExperiment &targeted_exp, bool legacy_traml_id=false) | TransitionPQPReader | |
convertTargetedExperimentToPQP(const char *filename, OpenMS::TargetedExperiment &targeted_exp) | TransitionPQPReader | |
convertTargetedExperimentToTSV(const char *filename, OpenMS::TargetedExperiment &targeted_exp) | TransitionTSVReader | |
convertTransition_(const ReactionMonitoringTransition *it, OpenMS::TargetedExperiment &targeted_exp) | TransitionTSVReader | protected |
convertTSVToTargetedExperiment(const char *filename, FileTypes::Type filetype, OpenMS::TargetedExperiment &targeted_exp) | TransitionTSVReader | |
convertTSVToTargetedExperiment(const char *filename, FileTypes::Type filetype, OpenSwath::LightTargetedExperiment &targeted_exp) | TransitionTSVReader | |
current_logger_ | ProgressLogger | mutableprotected |
DefaultParamHandler(const String &name) | DefaultParamHandler | |
DefaultParamHandler(const DefaultParamHandler &rhs) | DefaultParamHandler | |
defaults_ | DefaultParamHandler | protected |
defaultsToParam_() | DefaultParamHandler | protected |
endProgress() const | ProgressLogger | |
error_name_ | DefaultParamHandler | protected |
getDefaults() const | DefaultParamHandler | |
getLogType() const | ProgressLogger | |
getName() const | DefaultParamHandler | |
getParameters() const | DefaultParamHandler | |
getSubsections() const | DefaultParamHandler | |
GUI enum value | ProgressLogger | |
last_invoke_ | ProgressLogger | mutableprotected |
LogType enum name | ProgressLogger | |
logTypeToFactoryName_(LogType type) | ProgressLogger | protectedstatic |
NONE enum value | ProgressLogger | |
OpenMS::operator=(const ProgressLogger &other) | ProgressLogger | |
OpenMS::DefaultParamHandler::operator=(const DefaultParamHandler &rhs) | DefaultParamHandler | virtual |
operator==(const DefaultParamHandler &rhs) const | DefaultParamHandler | virtual |
param_ | DefaultParamHandler | protected |
ProgressLogger() | ProgressLogger | |
ProgressLogger(const ProgressLogger &other) | ProgressLogger | |
readPQPInput_(const char *filename, std::vector< TSVTransition > &transition_list, bool legacy_traml_id=false) | TransitionPQPReader | private |
recursion_depth_ | ProgressLogger | protectedstatic |
setLogType(LogType type) const | ProgressLogger | |
setName(const String &name) | DefaultParamHandler | |
setParameters(const Param ¶m) | DefaultParamHandler | |
setProgress(SignedSize value) const | ProgressLogger | |
startProgress(SignedSize begin, SignedSize end, const String &label) const | ProgressLogger | |
subsections_ | DefaultParamHandler | protected |
TransitionPQPReader() | TransitionPQPReader | |
TransitionTSVReader() | TransitionTSVReader | |
TSVToTargetedExperiment_(std::vector< TSVTransition > &transition_list, OpenMS::TargetedExperiment &exp) | TransitionTSVReader | protected |
TSVToTargetedExperiment_(std::vector< TSVTransition > &transition_list, OpenSwath::LightTargetedExperiment &exp) | TransitionTSVReader | protected |
type_ | ProgressLogger | mutableprotected |
updateMembers_() | TransitionTSVReader | protectedvirtual |
validateTargetedExperiment(OpenMS::TargetedExperiment &targeted_exp) | TransitionTSVReader | |
warn_empty_defaults_ | DefaultParamHandler | protected |
writePQPOutput_(const char *filename, OpenMS::TargetedExperiment &targeted_exp) | TransitionPQPReader | private |
~DefaultParamHandler() | DefaultParamHandler | virtual |
~ProgressLogger() | ProgressLogger | |
~TransitionPQPReader() | TransitionPQPReader | |
~TransitionTSVReader() | TransitionTSVReader | |