CVTermListInterface.h

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//                   OpenMS -- Open-Source Mass Spectrometry
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// Copyright The OpenMS Team -- Eberhard Karls University Tuebingen,
// ETH Zurich, and Freie Universitaet Berlin 2002-2018.
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// $Maintainer: Hannes Roest $
// $Authors: Hannes Roest $
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#pragma once

#include <OpenMS/METADATA/MetaInfoInterface.h>
#include <OpenMS/METADATA/CVTerm.h>
#include <OpenMS/DATASTRUCTURES/Map.h>

namespace OpenMS
{

  class CVTermList;

  class OPENMS_DLLAPI CVTermListInterface :
    public MetaInfoInterface
  {

  public:

    CVTermListInterface();

    CVTermListInterface(const CVTermListInterface & rhs);

    // Destructor (non virtual)
    ~CVTermListInterface();

    CVTermListInterface & operator=(const CVTermListInterface & rhs);

    bool operator==(const CVTermListInterface& rhs) const;

    bool operator!=(const CVTermListInterface& rhs) const;

    void replaceCVTerms(Map<String, std::vector<CVTerm> > & cv_terms);

    void setCVTerms(const std::vector<CVTerm>& terms);

    void replaceCVTerm(const CVTerm& cv_term);

    void replaceCVTerms(const std::vector<CVTerm>& cv_terms, const String& accession);

    void replaceCVTerms(const Map<String, std::vector<CVTerm> >& cv_term_map);

    void consumeCVTerms(const Map<String, std::vector<CVTerm> >& cv_term_map);

    const Map<String, std::vector<CVTerm> >& getCVTerms() const;

    void addCVTerm(const CVTerm& term);

    bool hasCVTerm(const String& accession) const;

    bool empty() const;

  private:

    void createIfNotExists_(); 

    CVTermList* cvt_ptr_;
  };

} // namespace OpenMS