ParamXMLFile Class Reference

The file pendant of the Param class used to load and store the param datastructure as paramXML. More...

#include <OpenMS/FORMAT/ParamXMLFile.h>

Inheritance diagram for ParamXMLFile:

Public Member Functions
	ParamXMLFile ()
	Constructor. More...
void	store (const String &filename, const Param &param) const
	Write XML file. More...
void	writeXMLToStream (std::ostream *os_ptr, const Param &param) const
	Write XML to output stream. More...
void	load (const String &filename, Param &param)
	Read XML file. More...
Public Member Functions inherited from XMLFile
	XMLFile ()
	Default constructor. More...
	XMLFile (const String &schema_location, const String &version)
	Constructor that sets the schema location. More...
virtual	~XMLFile ()
	Destructor. More...
bool	isValid (const String &filename, std::ostream &os)
	Checks if a file validates against the XML schema. More...
const String &	getVersion () const
	return the version of the schema More...

Additional Inherited Members
Protected Member Functions inherited from XMLFile
void	parse_ (const String &filename, XMLHandler *handler)
	Parses the XML file given by filename using the handler given by handler. More...
void	parseBuffer_ (const std::string &buffer, XMLHandler *handler)
	Parses the in-memory buffer given by buffer using the handler given by handler. More...
void	save_ (const String &filename, XMLHandler *handler) const
	Stores the contents of the XML handler given by handler in the file given by filename. More...
void	enforceEncoding_ (const String &encoding)
Protected Attributes inherited from XMLFile
String	schema_location_
	XML schema file location. More...
String	schema_version_
	Version string. More...
String	enforced_encoding_
	Encoding string that replaces the encoding (system dependent or specified in the XML). Disabled if empty. Used as a workaround for XTandem output xml. More...

Detailed Description

The file pendant of the Param class used to load and store the param datastructure as paramXML.

A documented schema for this format can be found at https://github.com/OpenMS/OpenMS/tree/develop/share/OpenMS/SCHEMAS

Constructor & Destructor Documentation

ParamXMLFile()

ParamXMLFile

(

)

Constructor.

Member Function Documentation

load()

void load	(	const String &	filename,
		Param &	param
	)

Read XML file.

Parameters

filename	The file from where to read the Param object.
param	The param object where the read data should be stored.

Exceptions

Exception::FileNotFound	is thrown if the file could not be found
Exception::ParseError	is thrown if an error occurs during parsing

Referenced by TOPPASBase::loadPreferences(), TOPPViewBase::loadPreferences(), main(), INIFileEditorWindow::openFile(), and DigestionEnzymeDB< DigestionEnzymeRNA, RNaseDB >::readEnzymesFromFile_().

store()

void store	(	const String &	filename,
		const Param &	param
	)		const

Write XML file.

Parameters

filename	The filename where the param data structure should be stored.
param	The Param class that should be stored in the file.

Exceptions

Exception::UnableToCreateFile

is thrown if the file could not be created

Referenced by INIFileEditorWindow::saveFile(), INIFileEditorWindow::saveFileAs(), TOPPASBase::savePreferences(), and TOPPViewBase::savePreferences().

writeXMLToStream()

void writeXMLToStream	(	std::ostream *	os_ptr,
		const Param &	param
	)		const

Write XML to output stream.

Parameters

os_ptr	The stream where the param class should be written to.
param	The Param class that should be written to the stream.