OpenMS
2.4.0
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Statistics for quantitation performance and comparison of NNLS vs. naive method (aka matrix inversion) More...
#include <OpenMS/ANALYSIS/QUANTITATION/IsobaricQuantifierStatistics.h>
Public Member Functions | |
IsobaricQuantifierStatistics () | |
Create stats object. More... | |
void | reset () |
Reset statistics object. More... | |
IsobaricQuantifierStatistics (const IsobaricQuantifierStatistics &other) | |
Copy c'tor. More... | |
IsobaricQuantifierStatistics & | operator= (const IsobaricQuantifierStatistics &rhs) |
Assignment operator. More... | |
Public Attributes | |
Size | channel_count |
4plex, 6plex, or 8 plex?! More... | |
Size | iso_number_ms2_negative |
number of MS2 spectra where one or more channels had negative solution More... | |
Size | iso_number_reporter_negative |
number of channels where naive solution was negative More... | |
Size | iso_number_reporter_different |
number of channels >0 where naive solution was different; happens when naive solution is negative in other channels More... | |
double | iso_solution_different_intensity |
absolute intensity difference between both solutions (for channels > 0) More... | |
double | iso_total_intensity_negative |
only for spectra where naive solution is negative More... | |
Size | number_ms2_total |
total number of MS2 spectra More... | |
Size | number_ms2_empty |
number of empty MS2 (no reporters at all) More... | |
std::map< String, Size > | empty_channels |
Channel_ID -> Missing; indicating the number of empty channels from all MS2 scans, i.e., numbers are between number_ms2_empty and number_ms2_total. More... | |
Statistics for quantitation performance and comparison of NNLS vs. naive method (aka matrix inversion)
Create stats object.
IsobaricQuantifierStatistics | ( | const IsobaricQuantifierStatistics & | other | ) |
Copy c'tor.
IsobaricQuantifierStatistics& operator= | ( | const IsobaricQuantifierStatistics & | rhs | ) |
Assignment operator.
void reset | ( | ) |
Reset statistics object.
Size channel_count |
4plex, 6plex, or 8 plex?!
Channel_ID -> Missing; indicating the number of empty channels from all MS2 scans, i.e., numbers are between number_ms2_empty and number_ms2_total.
Size iso_number_ms2_negative |
number of MS2 spectra where one or more channels had negative solution
Size iso_number_reporter_different |
number of channels >0 where naive solution was different; happens when naive solution is negative in other channels
Size iso_number_reporter_negative |
number of channels where naive solution was negative
double iso_solution_different_intensity |
absolute intensity difference between both solutions (for channels > 0)
double iso_total_intensity_negative |
only for spectra where naive solution is negative
Size number_ms2_empty |
number of empty MS2 (no reporters at all)
Size number_ms2_total |
total number of MS2 spectra