Internal structure to represent a transition. More...

#include <OpenMS/ANALYSIS/OPENSWATH/TransitionTSVFile.h>

Public Member Functions
	TSVTransition ()

bool	isPeptide ()

Public Attributes
double	precursor

double	product

double	rt_calibrated

String	transition_name

double	CE

double	library_intensity

String	group_id

bool	decoy

String	PeptideSequence

String	ProteinName

String	Annotation

String	FullPeptideName

String	CompoundName

String	SMILES

String	SumFormula

String	precursor_charge

String	peptide_group_label

String	label_type

String	fragment_charge

int	fragment_nr

double	fragment_mzdelta

double	drift_time

int	fragment_modification

String	fragment_type

String	uniprot_id

bool	detecting_transition

bool	identifying_transition

bool	quantifying_transition

std::vector< String >	peptidoforms

Detailed Description

Internal structure to represent a transition.

Internal structure to represent a single line from a transition input file (one transition).

Constructor & Destructor Documentation

◆ TSVTransition()

TSVTransition ( )

inline

Member Function Documentation

◆ isPeptide()

bool isPeptide ( )

inline

Member Data Documentation

◆ Annotation

String Annotation

◆ CE

double CE

◆ CompoundName

String CompoundName

◆ decoy

bool decoy

◆ detecting_transition

bool detecting_transition

◆ drift_time

double drift_time

◆ fragment_charge

String fragment_charge

◆ fragment_modification

int fragment_modification

◆ fragment_mzdelta

double fragment_mzdelta

◆ fragment_nr

int fragment_nr

◆ fragment_type

String fragment_type

◆ FullPeptideName

String FullPeptideName

◆ group_id

String group_id

◆ identifying_transition

bool identifying_transition

◆ label_type

String label_type

◆ library_intensity

double library_intensity

◆ peptide_group_label

String peptide_group_label

◆ PeptideSequence

String PeptideSequence

◆ peptidoforms

std::vector<String> peptidoforms

◆ precursor

double precursor

◆ precursor_charge

String precursor_charge

◆ product

double product

◆ ProteinName

String ProteinName

◆ quantifying_transition

bool quantifying_transition

◆ rt_calibrated

double rt_calibrated

◆ SMILES

String SMILES

◆ SumFormula

String SumFormula

◆ transition_name

String transition_name

◆ uniprot_id

String uniprot_id

Public Member Functions

Public Attributes