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OpenMS
2.5.0
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106 void resetMembers_();
109 void endElement(
const XMLCh *
const ,
const XMLCh *
const ,
const XMLCh *
const qname)
override;
112 void startElement(
const XMLCh *
const ,
const XMLCh *
const ,
const XMLCh *
const qname,
const xercesc::Attributes & attributes)
override;
115 void registerProtein_(
const String & protein_name);
129 void matchModification_(
const double mass,
const String & origin,
String & modification_description);
Used to load (storing not supported, yet) ProtXML files.
Definition: ProtXMLFile.h:70
ProteinGroup protein_group_
protein group
Definition: ProtXMLFile.h:140
Base class for XML handlers.
Definition: XMLHandler.h:151
PeptideIdentification * pep_id_
Pointer to peptide identification.
Definition: ProtXMLFile.h:136
A more convenient string class.
Definition: String.h:58
Representation of a protein identification run.
Definition: ProteinIdentification.h:71
Main OpenMS namespace.
Definition: FeatureDeconvolution.h:46
Represents the peptide hits for a spectrum.
Definition: PeptideIdentification.h:62
ProteinIdentification::ProteinGroup ProteinGroup
A protein group (set of indices into ProteinIdentification)
Definition: ProtXMLFile.h:77
PeptideHit * pep_hit_
Temporary peptide hit.
Definition: ProtXMLFile.h:138
Base class for loading/storing XML files that have a handler derived from XMLHandler.
Definition: XMLFile.h:48
Bundles multiple (e.g. indistinguishable) proteins in a group.
Definition: ProteinIdentification.h:81
Representation of a peptide hit.
Definition: PeptideHit.h:54