errorIfAlreadyExists(std::set< T > &container, T &item, const String &message) | ExperimentalDesign | privatestatic |
ExperimentalDesign()=default | ExperimentalDesign | |
ExperimentalDesign(const MSFileSection &msfile_section, const SampleSection &sample_section) | ExperimentalDesign | |
fromConsensusMap(const ConsensusMap &c) | ExperimentalDesign | static |
fromFeatureMap(const FeatureMap &f) | ExperimentalDesign | static |
fromIdentifications(const std::vector< ProteinIdentification > &proteins) | ExperimentalDesign | static |
getConditionToPathLabelVector() const | ExperimentalDesign | |
getConditionToSampleMapping() const | ExperimentalDesign | |
getFileNames_(bool basename) const | ExperimentalDesign | private |
getFractions_() const | ExperimentalDesign | private |
getFractionToMSFilesMapping() const | ExperimentalDesign | |
getLabels_() const | ExperimentalDesign | private |
getMSFileSection() const | ExperimentalDesign | |
getNumberOfFractionGroups() const | ExperimentalDesign | |
getNumberOfFractions() const | ExperimentalDesign | |
getNumberOfLabels() const | ExperimentalDesign | |
getNumberOfMSFiles() const | ExperimentalDesign | |
getNumberOfSamples() const | ExperimentalDesign | |
getPathLabelToConditionMapping(bool use_basename_only) const | ExperimentalDesign | |
getPathLabelToFractionGroupMapping(bool use_basename_only) const | ExperimentalDesign | |
getPathLabelToFractionMapping(bool use_basename_only) const | ExperimentalDesign | |
getPathLabelToPrefractionationMapping(bool use_basename_only) const | ExperimentalDesign | |
getPathLabelToSampleMapping(bool use_basename_only) const | ExperimentalDesign | |
getSample(unsigned fraction_group, unsigned label=1) | ExperimentalDesign | |
getSampleSection() const | ExperimentalDesign | |
getSampleToConditionMapping() const | ExperimentalDesign | |
getSampleToPrefractionationMapping() const | ExperimentalDesign | |
getUniqueSampleRowToSampleMapping() const | ExperimentalDesign | |
isFractionated() const | ExperimentalDesign | |
isValid_() | ExperimentalDesign | private |
msfile_section_ | ExperimentalDesign | private |
MSFileSection typedef | ExperimentalDesign | |
pathLabelMapper_(bool, unsigned(*f)(const ExperimentalDesign::MSFileSectionEntry &)) const | ExperimentalDesign | private |
sameNrOfMSFilesPerFraction() const | ExperimentalDesign | |
sample_section_ | ExperimentalDesign | private |
setMSFileSection(const MSFileSection &msfile_section) | ExperimentalDesign | |
setSampleSection(const SampleSection &sample_section) | ExperimentalDesign | |
sort_() | ExperimentalDesign | private |