|
MorphologicalFilter (OpenMS) |
MRMAssay (OpenMS) |
_Alloc_base (KDTree) |
MRMBatchFeatureSelector (OpenMS) |
_Base_iterator (KDTree) |
MRMDecoy (OpenMS) |
_Bracket_accessor (KDTree) |
MRMFeature (OpenMS) |
_Iterator (KDTree) |
MRMFeatureFilter (OpenMS) |
_Node (KDTree) |
MRMFeatureFinderScoring (OpenMS) |
_Node_base (KDTree) |
MRMFeatureOpenMS (OpenMS) |
_Node_compare (KDTree) |
MRMFeaturePicker (OpenMS) |
_Region (KDTree) |
MRMFeaturePickerFile (OpenMS) |
|
MRMFeatureQC (OpenMS) |
MRMFeatureQCFile (OpenMS) |
AAcid_ (seqan) |
MRMFeatureSelector (OpenMS) |
AAIndex (OpenMS) |
MRMFeatureSelector_test (OpenMS) |
AASequence (OpenMS) |
MRMFeatureSelectorQMIP (OpenMS) |
OPXLDataStructs::AASeqWithMass (OpenMS) |
MRMFeatureSelectorScore (OpenMS) |
OPXLDataStructs::AASeqWithMassComparator (OpenMS) |
MRMFragmentSelection (OpenMS) |
FuzzyStringComparator::AbortComparison (OpenMS) |
MRMIonSeries (OpenMS) |
AbsoluteQuantitation (OpenMS) |
MRMMapping (OpenMS) |
AbsoluteQuantitationMethod (OpenMS) |
MRMRTNormalizer (OpenMS) |
AbsoluteQuantitationMethodFile (OpenMS) |
MRMScoring (OpenSwath) |
AbsoluteQuantitationStandards (OpenMS) |
MRMTransitionGroup (OpenMS) |
AbsoluteQuantitationStandardsFile (OpenMS) |
MRMTransitionGroupPicker (OpenMS) |
SiriusMSFile::AccessionInfo (OpenMS) |
MS1FeatureMerger (OpenMS) |
AccurateMassSearchEngine (OpenMS) |
MS1Signal (OpenMS) |
AccurateMassSearchResult (OpenMS) |
MS2ConsensusSpectrum (OpenMS) |
Acquisition (OpenMS) |
MS2Feature (OpenMS) |
AcquisitionInfo (OpenMS) |
MS2File (OpenMS) |
AcquisitionInfoVisualizer (OpenMS) |
MS2Fragment (OpenMS) |
AcquisitionVisualizer (OpenMS) |
Ms2IdentificationRate (OpenMS) |
AcqusHandler (OpenMS::Internal) |
MS2Info (OpenMS) |
AdaptedIdentity (seqan) |
Ms2SpectrumStats (OpenMS) |
Adduct (OpenMS) |
MSChromatogram (OpenMS) |
AdductInfo (OpenMS) |
MSDataAggregatingConsumer (OpenMS) |
MSstatsFile::AggregatedConsensusInfo (OpenMS) |
MSDataCachedConsumer (OpenMS) |
AhoCorasickAmbiguous (OpenMS) |
MSDataChainingConsumer (OpenMS) |
always_true (KDTree) |
MSDataSqlConsumer (OpenMS) |
PepXMLFile::AminoAcidModification (OpenMS) |
MSDataStoringConsumer (OpenMS) |
MzIdentMLDOMHandler::AnalysisSoftware (OpenMS::Internal) |
MSDataTransformingConsumer (OpenMS) |
MSQuantifications::AnalysisSummary (OpenMS) |
MSDataWritingConsumer (OpenMS) |
NucleicAcidSearchEngine::AnnotatedHit |
ProteinResolver::MSDGroup (OpenMS) |
SimpleSearchEngineAlgorithm::AnnotatedHit_ (OpenMS) |
MSExperiment (OpenMS) |
Annotation1DCaret (OpenMS) |
ExperimentalDesign::MSFileSectionEntry (OpenMS) |
Annotation1DDistanceItem (OpenMS) |
MsInspectFile (OpenMS) |
Annotation1DItem (OpenMS) |
MSNumpressCoder (OpenMS) |
Annotation1DPeakItem (OpenMS) |
MSPeak (OpenMS) |
Annotation1DTextItem (OpenMS) |
MSPFile (OpenMS) |
Annotations1DContainer (OpenMS) |
MSPGenericFile (OpenMS) |
AnnotationStatistics (OpenMS) |
MSPGenericFile_friend (OpenMS) |
AppliedProcessingStep (OpenMS::IdentificationDataInternal) |
MSQuantifications (OpenMS) |
AreaIterator (OpenMS::Internal) |
MSSim (OpenMS) |
AScore (OpenMS) |
MSSpectrum (OpenMS) |
MSQuantifications::Assay (OpenMS) |
MSstatsFile (OpenMS) |
AsymmetricStatistics (OpenMS::Math) |
MSstatsFile::MSstatsLine_ (OpenMS) |
QcMLFile::Attachment (OpenMS) |
MSstatsFile::MSstatsTMTLine_ (OpenMS) |
AverageLinkage (OpenMS) |
MultiGradient (OpenMS) |
AveragePosition (OpenMS::Math) |
MultiGradientSelector (OpenMS) |
AxisPainter (OpenMS) |
MultiplexClustering (OpenMS) |
AxisTickCalculator (OpenMS) |
MultiplexDeltaMasses (OpenMS) |
AxisWidget (OpenMS) |
MultiplexDeltaMassesGenerator (OpenMS) |
|
MultiplexClustering::MultiplexDistance (OpenMS) |
MultiplexFilteredMSExperiment (OpenMS) |
BackgroundControl (OpenMS) |
MultiplexFilteredPeak (OpenMS) |
BackgroundIntensityBin (OpenMS) |
MultiplexFiltering (OpenMS) |
Base64 (OpenMS) |
MultiplexFilteringCentroided (OpenMS) |
BaseException (OpenMS::Exception) |
MultiplexFilteringProfile (OpenMS) |
BaseFeature (OpenMS) |
MultiplexIsotopicPeakPattern (OpenMS) |
BaseGroupFinder (OpenMS) |
MultiplexSatelliteCentroided (OpenMS) |
BaseLabeler (OpenMS) |
MultiplexSatelliteProfile (OpenMS) |
BaseModel (OpenMS) |
mySqrt (OpenSwath) |
BaseSuperimposer (OpenMS) |
MzCalibration (OpenMS) |
BaseVisualizer (OpenMS) |
MzDataFile (OpenMS) |
BaseVisualizerGUI (OpenMS) |
MzDataHandler (OpenMS::Internal) |
BasicProteinInferenceAlgorithm (OpenMS) |
MzDataValidator (OpenMS::Internal) |
BasicStatistics (OpenMS::Math) |
MzIdentMLDOMHandler (OpenMS::Internal) |
BayesianProteinInferenceAlgorithm (OpenMS) |
MzIdentMLFile (OpenMS) |
BernNorm (OpenMS) |
MzIdentMLHandler (OpenMS::Internal) |
BiGaussFitter1D (OpenMS) |
MzIdentMLValidator (OpenMS::Internal) |
BiGaussModel (OpenMS) |
Peak2D::MZLess (OpenMS) |
BilinearInterpolation (OpenMS::Math) |
Peak1D::MZLess (OpenMS) |
MzMLHandlerHelper::BinaryData (OpenMS::Internal) |
MSChromatogram::MZLess (OpenMS) |
BinaryDataArray (OpenMS::Interfaces) |
MzMLFile (OpenMS) |
BinaryTreeNode (OpenMS) |
MzMLHandler (OpenMS::Internal) |
EnzymaticDigestionLogModel::BindingSite_ (OpenMS) |
MzMLHandlerHelper (OpenMS::Internal) |
BinnedSharedPeakCount (OpenMS) |
MzMLSpectrumDecoder (OpenMS) |
BinnedSpectralContrastAngle (OpenMS) |
MzMLSqliteHandler (OpenMS::Internal) |
BinnedSpectrum (OpenMS) |
MzMLSqliteSwathHandler (OpenMS::Internal) |
TargetedSpectraExtractor::BinnedSpectrumComparator (OpenMS) |
MzMLSwathFileConsumer (OpenMS) |
BinnedSpectrumCompareFunctor (OpenMS) |
MzMLValidator (OpenMS::Internal) |
BinnedSumAgreeingIntensities (OpenMS) |
MzQuantMLFile (OpenMS) |
BitsPerValue< AAcid > (seqan) |
MzQuantMLHandler (OpenMS::Internal) |
BK_PrecPolicy (OpenMS::StringConversions) |
MzQuantMLValidator (OpenMS::Internal) |
FeatureFinderAlgorithmIsotopeWavelet::BoxElement (OpenMS) |
MzTab (OpenMS) |
IsotopeWaveletTransform::BoxElement (OpenMS) |
MzTabAssayMetaData (OpenMS) |
BSpline (eol_bspline) |
MzTabBoolean (OpenMS) |
BSpline2d (OpenMS) |
MzTabContactMetaData (OpenMS) |
BufferOverflow (OpenMS::Exception) |
MzTabCVMetaData (OpenMS) |
Bzip2Ifstream (OpenMS) |
MzTabDouble (OpenMS) |
Bzip2InputStream (OpenMS) |
MzTabDoubleList (OpenMS) |
|
MzTabFile (OpenMS) |
MzTabInstrumentMetaData (OpenMS) |
CachedmzML (OpenMS) |
MzTabInteger (OpenMS) |
CachedMzMLHandler (OpenMS::Internal) |
MzTabIntegerList (OpenMS) |
CachedSwathFileConsumer (OpenMS) |
MzTabMetaData (OpenMS) |
CalibrationData (OpenMS) |
MzTabModification (OpenMS) |
CentroidData (OpenMS) |
MzTabModificationList (OpenMS) |
CentroidPeak (OpenMS) |
MzTabModificationMetaData (OpenMS) |
ItraqConstants::ChannelInfo (OpenMS) |
MzTabMSRunMetaData (OpenMS) |
IsotopeCluster::ChargedIndexSet (OpenMS) |
MzTabNucleicAcidSectionRow (OpenMS) |
ChargePair (OpenMS) |
MzTabNullAbleBase (OpenMS) |
Chromatogram (OpenMS::Interfaces) |
MzTabNullAbleInterface (OpenMS) |
MzMLHandler::ChromatogramData (OpenMS::Internal) |
MzTabNullNaNAndInfAbleBase (OpenMS) |
ChromatogramExtractor (OpenMS) |
MzTabNullNaNAndInfAbleInterface (OpenMS) |
ChromatogramExtractorAlgorithm (OpenMS) |
MzTabOligonucleotideSectionRow (OpenMS) |
ChromatogramMeta (OpenMS::Interfaces) |
MzTabOSMSectionRow (OpenMS) |
ChromatogramPeak (OpenMS) |
MzTabParameter (OpenMS) |
ChromatogramSettings (OpenMS) |
MzTabParameterList (OpenMS) |
ChromatogramTools (OpenMS) |
MzTabPeptideSectionRow (OpenMS) |
ChromeleonFile (OpenMS) |
MzTabProteinSectionRow (OpenMS) |
ChromExtractParams (OpenMS) |
MzTabPSMSectionRow (OpenMS) |
Citation (OpenMS) |
MzTabSampleMetaData (OpenMS) |
EnzymaticDigestionLogModel::CleavageModel_ (OpenMS) |
MzTabSmallMoleculeSectionRow (OpenMS) |
OPXLDataStructs::CLSMScoreComparator (OpenMS) |
MzTabSoftwareMetaData (OpenMS) |
ClusterAnalyzer (OpenMS) |
MzTabSpectraRef (OpenMS) |
ClusteredMS2ConsensusSpectrum (OpenMS) |
MzTabString (OpenMS) |
ClusterFunctor (OpenMS) |
MzTabStringList (OpenMS) |
ClusterHierarchical (OpenMS) |
MzTabStudyVariableMetaData (OpenMS) |
ClusteringGrid (OpenMS) |
MZTrafoModel (OpenMS) |
ClusterProxyKD (OpenMS) |
MzXMLFile (OpenMS) |
CmpHypothesesByScore (OpenMS) |
MzXMLHandler (OpenMS::Internal) |
CmpMassTraceByMZ (OpenMS) |
|
CoarseIsotopePatternGenerator (OpenMS) |
ColorSelector (OpenMS) |
NASequence (OpenMS) |
ConsensusMap::ColumnHeader (OpenMS) |
SplineInterpolatedPeaks::Navigator (OpenMS) |
TargetedSpectraExtractor::Comparator (OpenMS) |
NetworkGetRequest (OpenMS) |
MapAlignmentAlgorithmSpectrumAlignment::Compare (OpenMS) |
NeutralLossDiffFilter (OpenMS) |
AccurateMassSearchEngine::CompareEntryAndMass_ (OpenMS) |
NeutralLossMarker (OpenMS) |
CompareTypeImpl< AAcid, char > (seqan) |
NLargest (OpenMS) |
CompareTypeImpl< AAcid, uint8_t > (seqan) |
SignalToNoiseEstimatorMedianRapid::NoiseEstimator (OpenMS) |
ComplementFilter (OpenMS) |
_Alloc_base::NoLeakAlloc (KDTree) |
ComplementMarker (OpenMS) |
NonNegativeLeastSquaresSolver (OpenMS) |
CompleteLinkage (OpenMS) |
NoopMSDataConsumer (OpenMS) |
CompNovoIdentification (OpenMS) |
NoopMSDataWritingConsumer (OpenMS) |
CompNovoIdentificationBase (OpenMS) |
Normalizer (OpenMS) |
CompNovoIdentificationCID (OpenMS) |
FeatureFinderDefs::NoSuccessor (OpenMS) |
CompNovoIonScoring (OpenMS) |
NotImplemented (OpenMS::Exception) |
CompNovoIonScoringBase (OpenMS) |
NucleicAcidSearchEngine |
CompNovoIonScoringCID (OpenMS) |
NucleicAcidSpectrumGenerator (OpenMS) |
Compomer (OpenMS) |
NullPointer (OpenMS::Exception) |
MRMFeatureQC::ComponentGroupPairQCs (OpenMS) |
MSNumpressCoder::NumpressConfig (OpenMS) |
MRMFeaturePicker::ComponentGroupParams (OpenMS) |
|
MRMFeatureQC::ComponentGroupQCs (OpenMS) |
MRMFeaturePicker::ComponentParams (OpenMS) |
O18Labeler (OpenMS) |
MRMFeatureQC::ComponentQCs (OpenMS) |
OfflinePrecursorIonSelection (OpenMS) |
Compound (OpenMS::TargetedExperimentHelper) |
OMS_TranslateTableAAToChar_ (seqan) |
SiriusMSFile::CompoundInfo (OpenMS) |
OMS_TranslateTableByteToAA_ (seqan) |
MetaboTargetedAssay::CompoundSpectrumPair (OpenMS) |
OMS_TranslateTableCharToAA_ (seqan) |
CompressedInputSource (OpenMS) |
OMSSACSVFile (OpenMS) |
ConfidenceScoring (OpenMS) |
OMSSAXMLFile (OpenMS) |
Configuration (OpenMS::TargetedExperimentHelper) |
OnDiscMSExperiment (OpenMS) |
ConnectedComponent (OpenMS) |
OpenMSLineEdit (OpenMS::Internal) |
ConsensusFeature (OpenMS) |
OpenMSOSInfo (OpenMS::Internal) |
ConsensusIDAlgorithm (OpenMS) |
OpenPepXLAlgorithm (OpenMS) |
ConsensusIDAlgorithmAverage (OpenMS) |
OpenPepXLLFAlgorithm (OpenMS) |
ConsensusIDAlgorithmBest (OpenMS) |
OpenSwath_Ind_Scores (OpenMS) |
ConsensusIDAlgorithmIdentity (OpenMS) |
OpenSwath_Scores (OpenMS) |
ConsensusIDAlgorithmPEPIons (OpenMS) |
OpenSwath_Scores_Usage (OpenMS) |
ConsensusIDAlgorithmPEPMatrix (OpenMS) |
OpenSwathCalibrationWorkflow (OpenMS) |
ConsensusIDAlgorithmRanks (OpenMS) |
OpenSwathDataAccessHelper (OpenMS) |
ConsensusIDAlgorithmSimilarity (OpenMS) |
OpenSwathHelper (OpenMS) |
ConsensusIDAlgorithmWorst (OpenMS) |
OpenSwathOSWWriter (OpenMS) |
ConsensusIsotopePattern (OpenMS) |
OpenSwathScoring (OpenMS) |
ConsensusMap (OpenMS) |
OpenSwathTSVWriter (OpenMS) |
ConsensusMapMergerAlgorithm (OpenMS) |
OpenSwathWorkflow (OpenMS) |
ConsensusMapNormalizerAlgorithmMedian (OpenMS) |
OpenSwathWorkflowBase (OpenMS) |
ConsensusMapNormalizerAlgorithmQuantile (OpenMS) |
OpenSwathWorkflowSonar (OpenMS) |
ConsensusMapNormalizerAlgorithmThreshold (OpenMS) |
MS1FeatureMerger::OPERATOR_FEATURE_TR (OpenMS) |
ConsensusXMLFile (OpenMS) |
LCMS::OPERATOR_FeatureCompare (OpenMS) |
ConsoleUtils (OpenMS) |
LCMS::OPERATOR_MZ (OpenMS) |
NASequence::ConstIterator (OpenMS) |
OptimizePeakDeconvolution (OpenMS) |
HashGrid::ConstIterator (OpenMS) |
OptimizePick (OpenMS) |
AASequence::ConstIterator (OpenMS) |
OptimizePick::OptPeakFunctor (OpenMS) |
ConstRefVector (OpenMS) |
OPXLDataStructs (OpenMS) |
ConstRefVector::ConstRefVectorConstIterator (OpenMS) |
OPXLHelper (OpenMS) |
ConstRefVector::ConstRefVectorIterator (OpenMS) |
OPXLSpectrumProcessingAlgorithms (OpenMS) |
Contact (OpenMS::TargetedExperimentHelper) |
OSBinaryDataArray (OpenSwath) |
ContactPerson (OpenMS) |
OSChromatogram (OpenSwath) |
ContactPersonVisualizer (OpenMS) |
OSChromatogramMeta (OpenSwath) |
MSExperiment::ContainerAdd_ (OpenMS) |
OSSpectrum (OpenSwath) |
MSExperiment::ContainerAdd_< ContainerValueType, false > (OpenMS) |
OSSpectrumMeta (OpenSwath) |
MSExperiment::ContainerAdd_< ContainerValueType, true > (OpenMS) |
OSWFile (OpenMS) |
RawMSSignalSimulation::ContaminantInfo (OpenMS) |
OutOfGrid (OpenMS::Exception) |
Contaminants (OpenMS) |
OutOfMemory (OpenMS::Exception) |
Contaminants::ContaminantsSummary (OpenMS) |
OutOfRange (OpenMS::Exception) |
ContinuousWaveletTransform (OpenMS) |
|
ContinuousWaveletTransformNumIntegration (OpenMS) |
ControlledVocabulary (OpenMS) |
PairComparatorFirstElement (OpenMS) |
ConversionError (OpenMS::Exception) |
PairComparatorFirstElementMore (OpenMS) |
ConvexHull2D (OpenMS) |
PairComparatorSecondElement (OpenMS) |
CrossLinksDB (OpenMS) |
PairComparatorSecondElementMore (OpenMS) |
OPXLDataStructs::CrossLinkSpectrumMatch (OpenMS) |
PairMatcherFirstElement (OpenMS) |
CsiFingerIdMzTabWriter::CsiAdapterHit (OpenMS) |
PairMatcherSecondElement (OpenMS) |
CsiFingerIdMzTabWriter::CsiAdapterIdentification (OpenMS) |
PAM30MS (seqan) |
CsiFingerIdMzTabWriter::CsiAdapterRun (OpenMS) |
Param (OpenMS) |
CsiFingerIdMzTabWriter (OpenMS) |
ParamEditor (OpenMS) |
CsvFile (OpenMS) |
ParamEditorDelegate (OpenMS::Internal) |
CSVWriter (OpenSwath) |
Param::ParamEntry (OpenMS) |
CubicSpline2d (OpenMS) |
ParameterInformation (OpenMS) |
CV (OpenMS::TargetedExperimentHelper) |
Param::ParamIterator (OpenMS) |
CVMappingFile (OpenMS) |
Param::ParamNode (OpenMS) |
CVMappingRule (OpenMS) |
ParamTree (OpenMS::Internal) |
CVMappings (OpenMS) |
ParamXMLFile (OpenMS) |
CVMappingTerm (OpenMS) |
ParamXMLHandler (OpenMS::Internal) |
CVReference (OpenMS) |
ParentMolecule (OpenMS::IdentificationDataInternal) |
CVTerm (OpenMS) |
ParentMoleculeGroup (OpenMS::IdentificationDataInternal) |
ControlledVocabulary::CVTerm (OpenMS) |
ParentMoleculeGrouping (OpenMS::IdentificationDataInternal) |
SemanticValidator::CVTerm (OpenMS::Internal) |
ParentPeakMower (OpenMS) |
CVTermList (OpenMS) |
ParseError (OpenMS::Exception) |
CVTermListInterface (OpenMS) |
Pattern< TNeedle, FuzzyAC > (seqan) |
|
PatternAuxData (seqan) |
IMSIsotopeDistribution::Peak (OpenMS::ims) |
EGHFitter1D::Data (OpenMS) |
Peak1D (OpenMS) |
EmgFitter1D::Data (OpenMS) |
Peak2D (OpenMS) |
OptimizePeakDeconvolution::Data (OpenMS) |
PeakAlignment (OpenMS) |
OptimizePick::Data (OpenMS) |
PeptideHit::PeakAnnotation (OpenMS) |
TwoDOptimization::Data (OpenMS) |
PeakIntegrator::PeakArea (OpenMS) |
MzIdentMLDOMHandler::DatabaseInput (OpenMS::Internal) |
PeakPickerCWT::PeakArea_ (OpenMS) |
DataFilters::DataFilter (OpenMS) |
PeakIntegrator::PeakBackground (OpenMS) |
DataFilterDialog (OpenMS) |
PeakPickerHiRes::PeakBoundary (OpenMS) |
DataFilters (OpenMS) |
PeakCandidate (OpenMS) |
DataMatrix (OpenSwath) |
PeakPickerMaxima::PeakCandidate (OpenMS) |
TransformationModel::DataPoint (OpenMS) |
PeakFileOptions (OpenMS) |
DataProcessing (OpenMS) |
PeakIndex (OpenMS) |
DataProcessingSoftware (OpenMS::IdentificationDataInternal) |
PeakIntegrator (OpenMS) |
DataProcessingStep (OpenMS::IdentificationDataInternal) |
PeakIntensityPredictor (OpenMS) |
DataProcessingVisualizer (OpenMS) |
PeakMarker (OpenMS) |
DataQuery (OpenMS::IdentificationDataInternal) |
PeakPickerCWT (OpenMS) |
DataValue (OpenMS) |
PeakPickerHiRes (OpenMS) |
Date (OpenMS) |
PeakPickerIterative (OpenMS) |
DateTime (OpenMS) |
PeakPickerMaxima (OpenMS) |
DaTrait (OpenMS) |
PeakPickerMRM (OpenMS) |
DBoundingBox (OpenMS) |
PeakPickerSH (OpenMS) |
DBSearchParam (OpenMS::IdentificationDataInternal) |
PeakShape (OpenMS) |
MzIdentMLDOMHandler::DBSequence (OpenMS::Internal) |
PeakIntegrator::PeakShapeMetrics (OpenMS) |
DeconvPeak (OpenMS) |
PeakSpectrumCompareFunctor (OpenMS) |
DecoyHelper (OpenMS) |
PeakTypeEstimator (OpenMS) |
DefaultParamHandler (OpenMS) |
PeakWidthEstimator (OpenMS) |
Deisotoper (OpenMS) |
PenaltyFactors (OpenMS::OptimizationFunctions) |
MultiplexDeltaMasses::DeltaMass (OpenMS) |
PenaltyFactorsIntensity (OpenMS::OptimizationFunctions) |
DeNovoAlgorithm (OpenMS) |
PepNovoInfile (OpenMS) |
DeNovoIdentification (OpenMS) |
PepNovoOutfile (OpenMS) |
DeNovoIonScoring (OpenMS) |
Peptide (OpenMS::TargetedExperimentHelper) |
DeNovoPostScoring (OpenMS) |
Peptide (OpenSwath) |
DepletedIDPool (OpenMS::Exception) |
PeptideAndProteinQuant (OpenMS) |
SvmTheoreticalSpectrumGenerator::DescriptorSet (OpenMS) |
FeatureFinderIdentificationAlgorithm::PeptideCompare (OpenMS) |
DetectabilitySimulation (OpenMS) |
PeptideCompound (OpenMS::TargetedExperimentHelper) |
IDBoostGraph::dfs_ccsplit_visitor (OpenMS::Internal) |
PeptideAndProteinQuant::PeptideData (OpenMS) |
DiaPrescore (OpenMS) |
IDFilter::PeptideDigestionFilter (OpenMS) |
DIAScoring (OpenMS) |
ProteinResolver::PeptideEntry (OpenMS) |
Digestion (OpenMS) |
PeptideEvidence (OpenMS) |
DigestionEnzyme (OpenMS) |
MzIdentMLDOMHandler::PeptideEvidence (OpenMS::Internal) |
DigestionEnzymeDB (OpenMS) |
PeptideHit (OpenMS) |
DigestionEnzymeProtein (OpenMS) |
PeptideHitVisualizer (OpenMS) |
DigestionEnzymeRNA (OpenMS) |
PeptideIdentification (OpenMS) |
IDFilter::DigestionFilter (OpenMS) |
PeptideIdentificationVisualizer (OpenMS) |
DigestionVisualizer (OpenMS) |
OPXLHelper::PeptideIDScoreComparator (OpenMS) |
DigestSimulation (OpenMS) |
PeptideIndexing (OpenMS) |
DIntervalBase (OpenMS::Internal) |
PeptideIndexing::PeptideProteinMatchInformation (OpenMS) |
DistanceMatrix (OpenMS) |
PeptideProteinResolution (OpenMS) |
FeatureDistance::DistanceParams_ (OpenMS) |
PeptideHit::PepXMLAnalysisResult (OpenMS) |
DivisionByZero (OpenMS::Exception) |
PepXMLFile (OpenMS) |
DocumentIdentifier (OpenMS) |
PepXMLFileMascot (OpenMS) |
DocumentIdentifierVisualizer (OpenMS) |
PercolatorFeatureSetHelper (OpenMS) |
DocumentIDTagger (OpenMS) |
PercolatorOutfile (OpenMS) |
ListUtils::DoubleTolerancePredicate_ (OpenMS) |
CompNovoIdentificationBase::Permut (OpenMS) |
DPeak (OpenMS) |
PlainMSDataWritingConsumer (OpenMS) |
DPosition (OpenMS) |
PointerComparator (OpenMS) |
DRange (OpenMS) |
PoseClusteringAffineSuperimposer (OpenMS) |
DTA2DFile (OpenMS) |
PoseClusteringShiftSuperimposer (OpenMS) |
DTAFile (OpenMS) |
Peak1D::PositionLess (OpenMS) |
|
PeakShape::PositionLess (OpenMS) |
Peak2D::PositionLess (OpenMS) |
EDTAFile (OpenMS) |
ChromatogramPeak::PositionLess (OpenMS) |
EGHFitter1D (OpenMS) |
Postcondition (OpenMS::Exception) |
EGHFitter1D::EGHFitterFunctor (OpenMS) |
PosteriorErrorProbabilityModel (OpenMS::Math) |
EGHModel (OpenMS) |
PpmTrait (OpenMS) |
EGHTraceFitter (OpenMS) |
PrecisionWrapper (OpenMS) |
EGHTraceFitter::EGHTraceFunctor (OpenMS) |
Precondition (OpenMS::Exception) |
EmgFitter1D::EgmFitterFunctor (OpenMS) |
Precursor (OpenMS) |
Element (OpenMS) |
PrecursorCorrection (OpenMS) |
ElementDB (OpenMS) |
NucleicAcidSearchEngine::PrecursorInfo |
ElementNotFound (OpenMS::Exception) |
PrecursorIonSelection (OpenMS) |
ElutionModelFitter (OpenMS) |
PrecursorIonSelectionPreprocessing (OpenMS) |
ElutionPeakDetection (OpenMS) |
PrecursorMassComparator (OpenMS) |
EmgFitter1D (OpenMS) |
PrecursorPurity (OpenMS) |
EmgGradientDescent (OpenMS) |
PrecursorVisualizer (OpenMS) |
EmgGradientDescent_friend (OpenMS) |
Prediction (OpenMS::TargetedExperimentHelper) |
EmgModel (OpenMS) |
SimpleSVM::Prediction (OpenMS) |
EmgScoring (OpenMS) |
FuzzyStringComparator::PrefixInfo_ (OpenMS) |
EmpiricalFormula (OpenMS) |
OPXLDataStructs::PreprocessedPairSpectra (OpenMS) |
XMLHandler::EndParsingSoftly (OpenMS::Internal) |
IDBoostGraph::PrintAddressVisitor (OpenMS::Internal) |
EnhancedTabBar (OpenMS) |
ProbablePhosphoSites (OpenMS) |
EnhancedTabBarWidgetInterface (OpenMS) |
ProcessData (OpenMS) |
EnhancedWorkspace (OpenMS) |
Product (OpenMS) |
EnzymaticDigestion (OpenMS) |
ProductModel (OpenMS) |
EnzymaticDigestionLogModel (OpenMS) |
ProductModel< 2 > (OpenMS) |
EqualInTolerance (OpenMS) |
ReactionMonitoringTransition::ProductMZLess (OpenMS) |
EuclideanSimilarity (OpenMS) |
ProductVisualizer (OpenMS) |
ExperimentalDesign (OpenMS) |
ProgressLogger (OpenMS) |
ExperimentalDesignFile (OpenMS) |
ProgressLogger::ProgressLoggerImpl (OpenMS) |
ExperimentalSettings (OpenMS) |
ProteaseDB (OpenMS) |
ExperimentalSettingsVisualizer (OpenMS) |
ProteaseDigestion (OpenMS) |
ExtendedIsotopeFitter1D (OpenMS) |
Protein (OpenSwath) |
ExtendedIsotopeModel (OpenMS) |
Protein (OpenMS::TargetedExperimentHelper) |
ChromatogramExtractorAlgorithm::ExtractionCoordinates (OpenMS) |
PeptideAndProteinQuant::ProteinData (OpenMS) |
|
ProteinResolver::ProteinEntry (OpenMS) |
ProteinIdentification::ProteinGroup (OpenMS) |
Factory (OpenMS) |
ProteinHit (OpenMS) |
FactoryBase (OpenMS) |
ProteinHit::ProteinHitAccessionHash (OpenMS) |
FailedAPICall (OpenMS::Exception) |
ProteinHit::ProteinHitPtrAccessionHash (OpenMS) |
FakeProcess (OpenMS) |
ProteinHitVisualizer (OpenMS) |
FalseDiscoveryRate (OpenMS) |
ProteinIdentification (OpenMS) |
FASTAContainer (OpenMS) |
ProteinIdentificationVisualizer (OpenMS) |
FASTAContainer< TFI_File > (OpenMS) |
ProteinInference (OpenMS) |
FASTAContainer< TFI_Vector > (OpenMS) |
OPXLDataStructs::ProteinProteinCrossLink (OpenMS) |
FASTAFile::FASTAEntry (OpenMS) |
ProteinResolver (OpenMS) |
FASTAFile (OpenMS) |
ProtonDistributionModel (OpenMS) |
Feature (OpenMS) |
ProtXMLFile (OpenMS) |
FeatureFinderIdentificationAlgorithm::FeatureCompare (OpenMS) |
PScore (OpenMS) |
AbsoluteQuantitationStandards::featureConcentration (OpenMS) |
PSLPFormulation (OpenMS) |
FeatureDeconvolution (OpenMS) |
PSProteinInference (OpenMS) |
FeatureDistance (OpenMS) |
PTMXMLFile (OpenMS) |
FeatureEditDialog (OpenMS) |
PTMXMLHandler (OpenMS::Internal) |
FeatureFileOptions (OpenMS) |
Publication (OpenMS::TargetedExperimentHelper) |
FeatureFinderIdentificationAlgorithm::FeatureFilterPeptides (OpenMS) |
IsobaricChannelExtractor::PuritySate_ (OpenMS) |
FeatureFinderIdentificationAlgorithm::FeatureFilterQuality (OpenMS) |
PrecursorPurity::PurityScores (OpenMS) |
FeatureFinder (OpenMS) |
|
FeatureFinderAlgorithm (OpenMS) |
FeatureFinderAlgorithmIsotopeWavelet (OpenMS) |
QApplication |
FeatureFinderAlgorithmMRM (OpenMS) |
QApplicationTOPP (OpenMS) |
FeatureFinderAlgorithmPicked (OpenMS) |
QCBase (OpenMS) |
FeatureFinderAlgorithmPickedHelperStructs (OpenMS) |
QcMLFile (OpenMS) |
FeatureFinderAlgorithmSH (OpenMS) |
QDate |
FeatureFinderAlgorithmSHCtrl (OpenMS) |
QDateTime |
FeatureFinderDefs (OpenMS) |
QDialog |
FeatureFinderIdentificationAlgorithm (OpenMS) |
QFileSystemWatcher |
FeatureFinderMultiplexAlgorithm (OpenMS) |
QGraphicsItem |
FeatureFindingMetabo (OpenMS) |
QGraphicsScene |
FeatureGroupingAlgorithm (OpenMS) |
QGraphicsView |
FeatureGroupingAlgorithmKD (OpenMS) |
QItemDelegate |
FeatureGroupingAlgorithmLabeled (OpenMS) |
QLineEdit |
FeatureGroupingAlgorithmQT (OpenMS) |
QListWidget |
FeatureGroupingAlgorithmUnlabeled (OpenMS) |
QMainWindow |
FeatureHandle (OpenMS) |
QMdiArea |
FeatureHandle::FeatureHandleMutable_ (OpenMS) |
QObject |
FeatureHypothesis (OpenMS) |
QOpenGLFunctions_2_0 |
FeatureLCProfile (OpenMS) |
QOpenGLWidget |
FeatureMap (OpenMS) |
QProcess |
FeatureMapping (OpenMS) |
QTabBar |
FeatureOpenMS (OpenMS) |
QTCluster (OpenMS) |
FeatureMapping::FeatureToMs2Indices (OpenMS) |
QTClusterFinder (OpenMS) |
FeatureXMLFile (OpenMS) |
QTextEdit |
IsotopeWavelet::fi_ (OpenMS) |
QTreeWidget |
FIAMSDataProcessor (OpenMS) |
QuadraticRegression (OpenMS::Math) |
FIAMSScheduler (OpenMS) |
BaseFeature::QualityLess (OpenMS) |
FidHandler (OpenMS::Internal) |
QcMLFile::QualityParameter (OpenMS) |
File (OpenMS) |
QuantitativeExperimentalDesign (OpenMS) |
FileEmpty (OpenMS::Exception) |
QueryMatchGroup (OpenMS::IdentificationDataInternal) |
FileHandler (OpenMS) |
QWidget |
FileMapping (OpenMS::Internal) |
|
FileNameTooLong (OpenMS::Exception) |
FileNotFound (OpenMS::Exception) |
Range (OpenMS) |
FileNotReadable (OpenMS::Exception) |
RangeManager (OpenMS) |
FileNotWritable (OpenMS::Exception) |
PeptideHit::RankLess (OpenMS) |
FileTypes (OpenMS) |
RANSAC (OpenMS::Math) |
FileWatcher (OpenMS) |
RansacModel (OpenMS::Math) |
FilterFunctor (OpenMS) |
RansacModelLinear (OpenMS::Math) |
FineIsotopePatternGenerator (OpenMS) |
RansacModelQuadratic (OpenMS::Math) |
Fitter1D (OpenMS) |
RANSACParam (OpenMS::Math) |
FloatDataArray (OpenMS::DataArrays) |
ConsensusFeature::Ratio (OpenMS) |
FragmentMassError::FMEStatistics (OpenMS) |
RawData (OpenMS) |
PeptideIndexing::FoundProteinFunctor (OpenMS) |
RawMSSignalSimulation (OpenMS) |
RNPxlFragmentAnnotationHelper::FragmentAnnotationDetail_ (OpenMS::Internal) |
RawTandemMSSignalSimulation (OpenMS) |
FragmentMassError (OpenMS) |
ReactionMonitoringTransition (OpenMS) |
FTPeakDetectController (OpenMS) |
StringUtils::real_policies_NANfixed_ (OpenMS) |
FullSwathFileConsumer (OpenMS) |
RealMassDecomposer (OpenMS::ims) |
GumbelMaxLikelihoodFitter::Functor (OpenMS::Math) |
RegularSwathFileConsumer (OpenMS) |
FuzzyStringComparator (OpenMS) |
Base64::Reinterpreter32_ (OpenMS) |
|
Base64::Reinterpreter64_ (OpenMS) |
RequiredParameterNotGiven (OpenMS::Exception) |
GammaDistributionFitter::GammaDistributionFitResult (OpenMS::Math) |
Residue (OpenMS) |
GammaDistributionFitter (OpenMS::Math) |
ResidueDB (OpenMS) |
GaussFilter (OpenMS) |
ResidueModification (OpenMS) |
GaussFilterAlgorithm (OpenMS) |
ProteinResolver::ResolverResult (OpenMS) |
GaussFitter::GaussFitResult (OpenMS::Math) |
DecoyHelper::Result (OpenMS) |
GaussFitter (OpenMS::Math) |
MorpheusScore::Result (OpenMS) |
GaussFitter1D (OpenMS) |
RetentionTime (OpenMS::TargetedExperimentHelper) |
SignalToNoiseEstimator::GaussianEstimate (OpenMS) |
ReverseComparator (OpenMS) |
GaussModel (OpenMS) |
Ribonucleotide (OpenMS) |
GaussTraceFitter (OpenMS) |
RibonucleotideDB (OpenMS) |
GaussTraceFitter::GaussTraceFunctor (OpenMS) |
RichPeak2D (OpenMS) |
LevMarqFitter1D::GenericFunctor (OpenMS) |
RNaseDB (OpenMS) |
TraceFitter::GenericFunctor (OpenMS) |
RNaseDigestion (OpenMS) |
IDFilter::GetMatchingItems (OpenMS) |
RNPxlFragmentAnnotationHelper (OpenMS::Internal) |
IDBoostGraph::GetPosteriorVisitor (OpenMS::Internal) |
RNPxlMarkerIonExtractor (OpenMS) |
GlobalExceptionHandler (OpenMS::Exception) |
RNPxlModificationMassesResult (OpenMS) |
glp_prob |
RNPxlModificationsGenerator (OpenMS) |
GoodDiffFilter (OpenMS) |
RNPxlReport (OpenMS) |
Gradient (OpenMS) |
RNPxlReportRow (OpenMS) |
GradientVisualizer (OpenMS) |
RNPxlReportRowHeader (OpenMS) |
GridBasedCluster (OpenMS) |
ROCCurve (OpenMS::Math) |
GridBasedClustering (OpenMS) |
MzTabNucleicAcidSectionRow::RowCompare (OpenMS) |
GridFeature (OpenMS) |
MzTabProteinSectionRow::RowCompare (OpenMS) |
GridSearch (OpenMS) |
MzTabPeptideSectionRow::RowCompare (OpenMS) |
GUIHelpers (OpenMS) |
MzTabPSMSectionRow::RowCompare (OpenMS) |
GUIProgressLoggerImpl (OpenMS) |
MzTabOligonucleotideSectionRow::RowCompare (OpenMS) |
GumbelDistributionFitter::GumbelDistributionFitResult (OpenMS::Math) |
MzTabOSMSectionRow::RowCompare (OpenMS) |
GumbelMaxLikelihoodFitter::GumbelDistributionFitResult (OpenMS::Math) |
RTAlignment (OpenMS) |
GumbelDistributionFitter (OpenMS::Math) |
MZTrafoModel::RTLess (OpenMS) |
GumbelMaxLikelihoodFitter::GumbelDistributionFunctor (OpenMS::Math) |
Peak2D::RTLess (OpenMS) |
GumbelMaxLikelihoodFitter (OpenMS::Math) |
MSSpectrum::RTLess (OpenMS) |
GzipIfstream (OpenMS) |
OSSpectrumMeta::RTLess (OpenSwath) |
GzipInputStream (OpenMS) |
ChromatogramPeak::RTLess (OpenMS) |
|
FeatureFinderIdentificationAlgorithm::RTRegion (OpenMS) |
RTSimulation (OpenMS) |
HasActivationMethod (OpenMS) |
AbsoluteQuantitationStandards::runConcentration (OpenMS) |
IDFilter::HasDecoyAnnotation (OpenMS) |
RWrapper (OpenMS) |
IDFilter::HasGoodScore (OpenMS) |
|
hash< OpenMS::String > (std) |
HashGrid (OpenMS) |
Sample (OpenMS) |
NucleicAcidSearchEngine::HasInvalidLength |
ExperimentalDesign::SampleSection (OpenMS) |
IDFilter::HasMatchingAccession (OpenMS) |
SampleTreatment (OpenMS) |
IDFilter::HasMatchingAccessionUnordered (OpenMS) |
SampleVisualizer (OpenMS) |
IDFilter::HasMaxMetaValue (OpenMS) |
SaveImageDialog (OpenMS) |
IDFilter::HasMaxRank (OpenMS) |
SavitzkyGolayFilter (OpenMS) |
HasMetaValue (OpenMS) |
Scaler (OpenMS) |
IDFilter::HasMetaValue (OpenMS) |
Ms2SpectrumStats::ScanEvent (OpenMS) |
IDFilter::HasNoHits (OpenMS) |
PSLPFormulation::ScanLess (OpenMS) |
HasPrecursorCharge (OpenMS) |
ScanWindow (OpenMS) |
HasScanMode (OpenMS) |
ScanWindowVisualizer (OpenMS) |
HasScanPolarity (OpenMS) |
ScoredProcessingResult (OpenMS::IdentificationDataInternal) |
HDF5Connector (OpenMS) |
PeptideHit::ScoreLess (OpenMS) |
HiddenMarkovModel (OpenMS) |
ProteinHit::ScoreLess (OpenMS) |
Histogram (OpenMS::Math) |
PeptideHit::ScoreMore (OpenMS) |
HistogramDialog (OpenMS) |
ProteinHit::ScoreMore (OpenMS) |
HistogramWidget (OpenMS) |
ScoreToTgtDecLabelPairs (OpenMS) |
HMMState (OpenMS) |
ScoreType (OpenMS::IdentificationDataInternal) |
Host< Pattern< TNeedle, FuzzyAC > > (seqan) |
ScoringMatrixData_< int, AminoAcid, AdaptedIdentity > (seqan) |
Host< Pattern< TNeedle, FuzzyAC > const > (seqan) |
ScoringMatrixData_< int, AminoAcid, PAM30MS > (seqan) |
HPLC (OpenMS) |
ProteinIdentification::SearchParameters (OpenMS) |
HPLCVisualizer (OpenMS) |
FeatureFinderAlgorithmPickedHelperStructs::Seed (OpenMS) |
HyperScore (OpenMS) |
SeedListGenerator (OpenMS) |
|
MRMFeatureSelector::SelectorParameters (OpenMS) |
SemanticValidator (OpenMS::Internal) |
IBSpectraFile (OpenMS) |
PrecursorIonSelection::SeqTotalScoreMore (OpenMS) |
IChromatogramsReader (OpenMS::Interfaces) |
PeptideHit::SequenceLessComparator (OpenMS) |
IChromatogramsWriter (OpenMS::Interfaces) |
SequestInfile (OpenMS) |
ICPLLabeler (OpenMS) |
SequestOutfile (OpenMS) |
IDataFrameWriter (OpenSwath) |
IDBoostGraph::SetPosteriorVisitor (OpenMS::Internal) |
IDBoostGraph (OpenMS::Internal) |
SHFeature (OpenMS) |
IDConflictResolverAlgorithm (OpenMS) |
SignalToNoiseEstimator (OpenMS) |
IDDecoyProbability (OpenMS) |
SignalToNoiseEstimatorMeanIterative (OpenMS) |
Identification (OpenMS) |
SignalToNoiseEstimatorMedian (OpenMS) |
IdentificationData (OpenMS) |
SignalToNoiseEstimatorMedianRapid (OpenMS) |
IdentificationDataConverter (OpenMS) |
SignalToNoiseOpenMS (OpenMS) |
IdentificationHit (OpenMS) |
SILACLabeler (OpenMS) |
Ms2IdentificationRate::IdentificationRateData (OpenMS) |
SimpleOpenMSSpectraFactory (OpenMS) |
IdentifiedCompound (OpenMS::IdentificationDataInternal) |
SimplePairFinder (OpenMS) |
IdentifiedSequence (OpenMS::IdentificationDataInternal) |
SimpleTSGXLMS::SimplePeak (OpenMS) |
IDFilter (OpenMS) |
SimpleTSGXLMS::SimplePeakComparator (OpenMS) |
IDMapper (OpenMS) |
SimpleSearchEngineAlgorithm (OpenMS) |
IDMergerAlgorithm (OpenMS) |
SimpleSVM (OpenMS) |
IDRipper (OpenMS) |
SimpleTSGXLMS (OpenMS) |
IDScoreGetterSetter (OpenMS) |
SimProtein (OpenMS::SimTypes) |
IdXMLFile (OpenMS) |
SimRandomNumberGenerator (OpenMS::SimTypes) |
InclusionExclusionList::IEWindow (OpenMS) |
ROCCurve::simsortdec (OpenMS::Math) |
IFeature (OpenSwath) |
SingleLinkage (OpenMS) |
IllegalArgument (OpenMS::Exception) |
SingletonRegistry (OpenMS) |
Map::IllegalKey (OpenMS) |
SiriusAdapterAlgorithm (OpenMS) |
IllegalPosition (OpenMS::Exception) |
SiriusMzTabWriter::SiriusAdapterHit (OpenMS) |
IllegalSelfOperation (OpenMS::Exception) |
SiriusMzTabWriter::SiriusAdapterIdentification (OpenMS) |
IllegalTreeOperation (OpenMS::Exception) |
SiriusMzTabWriter::SiriusAdapterRun (OpenMS) |
ILPDCWrapper (OpenMS) |
SiriusFragmentAnnotation (OpenMS) |
IMRMFeature (OpenSwath) |
SiriusMSFile (OpenMS) |
IMSAlphabet (OpenMS::ims) |
SiriusMzTabWriter (OpenMS) |
IMSAlphabetParser (OpenMS::ims) |
SiriusAdapterAlgorithm::SiriusTemporaryFileSystemObjects (OpenMS) |
IMSAlphabetTextParser (OpenMS::ims) |
ConsensusFeature::SizeLess (OpenMS) |
IMSDataConsumer (OpenMS::Interfaces) |
SizeUnderflow (OpenMS::Exception) |
IMSElement (OpenMS::ims) |
Software (OpenMS) |
IMSIsotopeDistribution (OpenMS::ims) |
SoftwareVisualizer (OpenMS) |
IncludeExcludeTarget (OpenMS) |
LPWrapper::SolverParam (OpenMS) |
InclusionExclusionList (OpenMS) |
SONARScoring (OpenMS) |
IncompatibleIterators (OpenMS::Exception) |
SourceFile (OpenMS) |
IndexedMzMLDecoder (OpenMS) |
SourceFileVisualizer (OpenMS) |
IndexedMzMLFileLoader (OpenMS) |
Spawn (seqan) |
IndexedMzMLHandler (OpenMS::Internal) |
SpecArrayFile (OpenMS) |
FeatureHandle::IndexLess (OpenMS) |
SpectraMerger::SpectraDistance_ (OpenMS) |
PSLPFormulation::IndexLess (OpenMS) |
IDMapper::SpectraIdentificationState (OpenMS) |
IndexOverflow (OpenMS::Exception) |
SpectraIdentificationViewWidget (OpenMS) |
PSLPFormulation::IndexTriple (OpenMS) |
SpectralMatch (OpenMS) |
IndexUnderflow (OpenMS::Exception) |
SpectralMatchScoreComparator (OpenMS) |
INIFileEditorWindow (OpenMS) |
QCBase::SpectraMap (OpenMS) |
InIntensityRange (OpenMS) |
SpectraMerger (OpenMS) |
INIUpdater (OpenMS) |
SpectraSTSimilarityScore (OpenMS) |
InMSLevelRange (OpenMS) |
SpectraViewWidget (OpenMS) |
InMzRange (OpenMS) |
Spectrum (OpenMS::Interfaces) |
InPrecursorMZRange (OpenMS) |
Spectrum1DCanvas (OpenMS) |
FuzzyStringComparator::InputLine (OpenMS) |
Spectrum1DGoToDialog (OpenMS) |
InRTRange (OpenMS) |
Spectrum1DPrefDialog (OpenMS::Internal) |
InspectInfile (OpenMS) |
Spectrum1DWidget (OpenMS) |
InspectOutfile (OpenMS) |
Spectrum2DCanvas (OpenMS) |
Instrument (OpenMS) |
Spectrum2DGoToDialog (OpenMS) |
Instrument (OpenMS::TargetedExperimentHelper) |
Spectrum2DPrefDialog (OpenMS::Internal) |
InstrumentSettings (OpenMS) |
Spectrum2DWidget (OpenMS) |
InstrumentSettingsVisualizer (OpenMS) |
Spectrum3DCanvas (OpenMS) |
InstrumentVisualizer (OpenMS) |
Spectrum3DOpenGLCanvas (OpenMS) |
ClusterFunctor::InsufficientInput (OpenMS) |
Spectrum3DPrefDialog (OpenMS::Internal) |
IntegerDataArray (OpenMS::DataArrays) |
Spectrum3DWidget (OpenMS) |
IntegerMassDecomposer (OpenMS::ims) |
SpectrumAccessOpenMS (OpenMS) |
IntensityBalanceFilter (OpenMS) |
SpectrumAccessOpenMSCached (OpenMS) |
IntensityIteratorWrapper (OpenMS::Internal) |
SpectrumAccessOpenMSInMemory (OpenMS) |
Peak1D::IntensityLess (OpenMS) |
SpectrumAccessQuadMZTransforming (OpenMS) |
Peak2D::IntensityLess (OpenMS) |
SpectrumAccessSqMass (OpenMS) |
ChromatogramPeak::IntensityLess (OpenMS) |
SpectrumAccessTransforming (OpenMS) |
InternalCalibration (OpenMS) |
SpectrumAddition (OpenMS) |
InterpolationModel (OpenMS) |
SpectrumAlignment (OpenMS) |
TransformationModelInterpolated::Interpolator (OpenMS) |
SpectrumAlignmentDialog (OpenMS) |
Interpretation (OpenMS::TargetedExperimentHelper) |
SpectrumAlignmentScore (OpenMS) |
InvalidIterator (OpenMS::Exception) |
SpectrumAnnotator (OpenMS) |
InvalidParameter (OpenMS::Exception) |
SpectrumCanvas (OpenMS) |
InvalidRange (OpenMS::Exception) |
SpectrumCheapDPCorr (OpenMS) |
InvalidSize (OpenMS::Exception) |
MzXMLHandler::SpectrumData (OpenMS::Internal) |
InvalidValue (OpenMS::Exception) |
MzMLHandler::SpectrumData (OpenMS::Internal) |
IOException (OpenMS::Exception) |
SpectrumIdentification (OpenMS) |
TOPPASToolVertex::IOInfo (OpenMS) |
MzIdentMLDOMHandler::SpectrumIdentification (OpenMS::Internal) |
IonDetector (OpenMS) |
MzIdentMLDOMHandler::SpectrumIdentificationProtocol (OpenMS::Internal) |
IonDetectorVisualizer (OpenMS) |
SpectrumLookup (OpenMS) |
IonizationSimulation (OpenMS) |
SpectrumMeta (OpenMS::Interfaces) |
IonMobilityScoring (OpenMS) |
SpectrumMetaDataLookup::SpectrumMetaData (OpenMS) |
CompNovoIonScoringBase::IonScore (OpenMS) |
SpectrumMetaDataLookup (OpenMS) |
DeNovoIonScoring::IonScore (OpenMS) |
SpectrumPrecursorComparator (OpenMS) |
IonSource (OpenMS) |
SpectrumSettings (OpenMS) |
IonSourceVisualizer (OpenMS) |
SpectrumSettingsVisualizer (OpenMS) |
SvmTheoreticalSpectrumGenerator::IonType (OpenMS) |
SpectrumWidget (OpenMS) |
ProteinResolver::ISDGroup (OpenMS) |
SplineInterpolatedPeaks (OpenMS) |
IsEmptySpectrum (OpenMS) |
SplinePackage (OpenMS) |
IDScoreGetterSetter::IsHitType (OpenMS) |
SqliteConnector (OpenMS) |
IDScoreGetterSetter::IsIDType (OpenMS) |
SqMassFile::SqMassConfig (OpenMS) |
ISignalToNoise (OpenSwath) |
SqMassFile (OpenMS) |
IsInCollisionEnergyRange (OpenMS) |
SqrtMower (OpenMS) |
IsInIsolationWindow (OpenMS) |
squared_difference (KDTree) |
IsInIsolationWindowSizeRange (OpenMS) |
squared_difference_counted (KDTree) |
IsobaricChannelExtractor (OpenMS) |
StablePairFinder (OpenMS) |
IsobaricQuantitationMethod::IsobaricChannelInformation (OpenMS) |
PeptideAndProteinQuant::Statistics (OpenMS) |
IsobaricIsotopeCorrector (OpenMS) |
QCBase::Status (OpenMS) |
IsobaricNormalizer (OpenMS) |
SteinScottImproveScore (OpenMS) |
IsobaricQuantifier (OpenMS) |
StopWatch (OpenMS) |
IsobaricQuantifierStatistics (OpenMS) |
FuzzyStringComparator::StreamElement_ (OpenMS) |
IsobaricQuantitationMethod (OpenMS) |
StreamHandler (OpenMS) |
IsoSpecGeneratorWrapper (OpenMS) |
LogStreamBuf::StreamStruct (OpenMS::Logger) |
IsoSpecOrderedGeneratorWrapper (OpenMS) |
String (OpenMS) |
IsoSpecThresholdGeneratorWrapper (OpenMS) |
StringDataArray (OpenMS::DataArrays) |
IsoSpecThresholdWrapper (OpenMS) |
StringListUtils (OpenMS) |
IsoSpecTotalProbGeneratorWrapper (OpenMS) |
StringManager (OpenMS::Internal) |
IsoSpecTotalProbWrapper (OpenMS) |
StringUtils (OpenMS) |
IsoSpecWrapper (OpenMS) |
StringView (OpenMS) |
IsotopeCluster (OpenMS) |
Summary (OpenMS) |
IsotopeDiffFilter (OpenMS) |
SummaryStatistics (OpenMS::Math) |
IsotopeDistribution (OpenMS) |
SuperHirnParameters (OpenMS) |
IsotopeDistributionCache (OpenMS) |
SuperHirnUtil (OpenMS) |
IsotopeFitter1D (OpenMS) |
SVMData (OpenMS) |
IsotopeMarker (OpenMS) |
SvmTheoreticalSpectrumGenerator::SvmModelParameterSet (OpenMS) |
IsotopeModel (OpenMS) |
SvmTheoreticalSpectrumGenerator (OpenMS) |
FeatureFinderAlgorithmPickedHelperStructs::IsotopePattern (OpenMS) |
SvmTheoreticalSpectrumGeneratorSet (OpenMS) |
IsotopePatternGenerator (OpenMS) |
SvmTheoreticalSpectrumGeneratorTrainer (OpenMS) |
IsotopeWavelet (OpenMS) |
SVMWrapper (OpenMS) |
IsotopeWaveletTransform (OpenMS) |
SVOutStream (OpenMS) |
IsotopicDist (OpenMS) |
SwathFile (OpenMS) |
ISpectraReader (OpenMS::Interfaces) |
SwathMap (OpenSwath) |
ISpectraWriter (OpenMS::Interfaces) |
SwathMapMassCorrection (OpenMS) |
ISpectrumAccess (OpenSwath) |
SwathQC (OpenSwath) |
IsZoomSpectrum (OpenMS) |
SwathWindowLoader (OpenMS) |
NASequence::Iterator (OpenMS) |
SysInfo (OpenMS) |
HashGrid::Iterator (OpenMS) |
|
AASequence::Iterator (OpenMS) |
IteratorWrapper (OpenMS::IdentificationDataInternal) |
Tagger (OpenMS) |
ITransitionGroup (OpenSwath) |
Tagging (OpenMS) |
ItraqConstants (OpenMS) |
TaggingVisualizer (OpenMS) |
ItraqEightPlexQuantitationMethod (OpenMS) |
TargetedExperiment (OpenSwath) |
ItraqFourPlexQuantitationMethod (OpenMS) |
TargetedExperiment (OpenMS) |
ITRAQLabeler (OpenMS) |
TargetedSpectraExtractor (OpenMS) |
|
File::TemporaryFiles_ (OpenMS) |
TextFile (OpenMS) |
JavaInfo (OpenMS) |
FeatureFinderAlgorithmPickedHelperStructs::TheoreticalIsotopePattern (OpenMS) |
|
TheoreticalSpectrumGenerationDialog (OpenMS) |
TheoreticalSpectrumGenerator (OpenMS) |
KDTree (KDTree) |
TheoreticalSpectrumGeneratorXLMS (OpenMS) |
KDTreeFeatureMaps (OpenMS) |
ThresholdMower (OpenMS) |
KDTreeFeatureNode (OpenMS) |
TIC (OpenMS) |
KroenikFile (OpenMS) |
TICFilter (OpenMS) |
|
TMTElevenPlexQuantitationMethod (OpenMS) |
TMTSixPlexQuantitationMethod (OpenMS) |
MultiplexDeltaMassesGenerator::Label (OpenMS) |
TMTSixteenPlexQuantitationMethod (OpenMS) |
LabeledPairFinder (OpenMS) |
TMTTenPlexQuantitationMethod (OpenMS) |
LabelFreeLabeler (OpenMS) |
TOFCalibration (OpenMS) |
IDBoostGraph::LabelVisitor (OpenMS::Internal) |
ToolDescription (OpenMS::Internal) |
LayerData (OpenMS) |
ToolDescriptionFile (OpenMS) |
LayerStatisticsDialog (OpenMS) |
ToolDescriptionHandler (OpenMS::Internal) |
LCElutionPeak (OpenMS) |
ToolDescriptionInternal (OpenMS::Internal) |
LCMS (OpenMS) |
ToolExternalDetails (OpenMS::Internal) |
LCMSCData (OpenMS) |
ToolHandler (OpenMS) |
LevMarqFitter1D (OpenMS) |
ToolsDialog (OpenMS) |
LexicographicComparator (OpenMS) |
TOPPASBase (OpenMS) |
LibSVMEncoder (OpenMS) |
TOPPASEdge (OpenMS) |
LightCompound (OpenSwath) |
TOPPASVertex::TOPPASFilenames (OpenMS) |
LightModification (OpenSwath) |
TOPPASInputFileDialog (OpenMS) |
LightProtein (OpenSwath) |
TOPPASInputFileListVertex (OpenMS) |
LightTargetedExperiment (OpenSwath) |
TOPPASInputFilesDialog (OpenMS) |
LightTransition (OpenSwath) |
TOPPASIOMappingDialog (OpenMS) |
LinearInterpolation (OpenMS::Math) |
TOPPASLogWindow (OpenMS) |
LinearRegression (OpenMS::Math) |
TOPPASMergerVertex (OpenMS) |
LinearRegressionWithoutIntercept (OpenMS::Math) |
TOPPASOutputFileListVertex (OpenMS) |
LinearResampler (OpenMS) |
TOPPASOutputFilesDialog (OpenMS) |
LinearResamplerAlign (OpenMS) |
TOPPASResource (OpenMS) |
ListEditor (OpenMS) |
TOPPASResources (OpenMS) |
ListEditorDelegate (OpenMS::Internal) |
TOPPASScene (OpenMS) |
ListTable (OpenMS::Internal) |
TOPPASSplitterVertex (OpenMS) |
ListUtils (OpenMS) |
TOPPASTabBar (OpenMS) |
LocalLinearMap::LLMParam (OpenMS) |
TOPPASToolConfigDialog (OpenMS) |
LocalLinearMap (OpenMS) |
TOPPASToolVertex (OpenMS) |
InternalCalibration::LockMass (OpenMS) |
TOPPASTreeView (OpenMS) |
LogStreamBuf::LogCacheStruct (OpenMS::Logger) |
TOPPASVertex (OpenMS) |
LogConfigHandler (OpenMS) |
TOPPASVertexNameDialog (OpenMS) |
LogStream (OpenMS::Logger) |
TOPPASWidget (OpenMS) |
LogStreamBuf (OpenMS::Logger) |
TOPPBase (OpenMS) |
LogStreamNotifier (OpenMS::Logger) |
TOPPGNPSExport |
SimpleTSGXLMS::LossIndex (OpenMS) |
TOPPOpenPepXL |
TheoreticalSpectrumGeneratorXLMS::LossIndex (OpenMS) |
TOPPOpenPepXLLF |
LowessSmoothing (OpenMS) |
TOPPOpenSwathBase (OpenMS) |
LPWrapper (OpenMS) |
TOPPASScene::TOPPProcess (OpenMS) |
PercolatorFeatureSetHelper::lq_PeptideEvidence (OpenMS) |
TOPPViewBase (OpenMS) |
PercolatorFeatureSetHelper::lq_ProteinHit (OpenMS) |
TOPPViewIdentificationViewBehavior (OpenMS) |
|
TOPPViewOpenDialog (OpenMS) |
TOPPViewPrefDialog (OpenMS::Internal) |
Map (OpenMS) |
TOPPViewSpectraViewBehavior (OpenMS) |
MapAlignmentAlgorithmIdentification (OpenMS) |
TOPPXFDR |
MapAlignmentAlgorithmKD (OpenMS) |
PrecursorIonSelection::TotalScoreMore (OpenMS) |
MapAlignmentAlgorithmPoseClustering (OpenMS) |
TraceFitter (OpenMS) |
MapAlignmentAlgorithmSpectrumAlignment (OpenMS) |
Param::ParamIterator::TraceInfo (OpenMS) |
MapAlignmentAlgorithmTreeGuided (OpenMS) |
TraMLFile (OpenMS) |
MapAlignmentEvaluationAlgorithm (OpenMS) |
TraMLHandler (OpenMS::Internal) |
MapAlignmentEvaluationAlgorithmPrecision (OpenMS) |
TraMLProduct (OpenMS::TargetedExperimentHelper) |
MapAlignmentEvaluationAlgorithmRecall (OpenMS) |
TraMLValidator (OpenMS::Internal) |
MapAlignmentTransformer (OpenMS) |
IDDecoyProbability::Transformation_ (OpenMS) |
MapConversion (OpenMS) |
TransformationDescription (OpenMS) |
AccurateMassSearchEngine::MappingEntry_ (OpenMS) |
TransformationModel (OpenMS) |
MappingParam (OpenMS::Internal) |
TransformationModelBSpline (OpenMS) |
ConsensusFeature::MapsLess (OpenMS) |
TransformationModelInterpolated (OpenMS) |
ModifiedPeptideGenerator::MapToResidueType (OpenMS) |
TransformationModelLinear (OpenMS) |
MarkerMower (OpenMS) |
TransformationModelLowess (OpenMS) |
MascotGenericFile (OpenMS) |
TransformationDescription::TransformationStatistics (OpenMS) |
MascotInfile (OpenMS) |
TransformationXMLFile (OpenMS) |
MascotRemoteQuery (OpenMS) |
TransitionGroupOpenMS (OpenMS) |
MascotXMLFile (OpenMS) |
TransitionHelper (OpenSwath) |
MascotXMLHandler (OpenMS::Internal) |
TransitionPQPFile (OpenMS) |
MassAnalyzer (OpenMS) |
TransitionTSVFile (OpenMS) |
MassAnalyzerVisualizer (OpenMS) |
IsotopeWaveletTransform::TransSpectrum (OpenMS) |
MassDecomposer (OpenMS::ims) |
TransitionTSVFile::TSVTransition (OpenMS) |
MassDecomposition (OpenMS) |
TwoDOptimization::TwoDOptFunctor (OpenMS) |
MassDecompositionAlgorithm (OpenMS) |
TwoDOptimization (OpenMS) |
MassExplainer (OpenMS) |
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IMSAlphabet::MassSortingCriteria_ (OpenMS::ims) |
FeatureFinderAlgorithmPickedHelperStructs::MassTrace (OpenMS) |
UnableToCalibrate (OpenMS::Exception) |
MassTrace (OpenMS) |
UnableToCreateFile (OpenMS::Exception) |
MasstraceCorrelator (OpenMS) |
UnableToFit (OpenMS::Exception) |
MassTraceDetection (OpenMS) |
UnimodXMLFile (OpenMS) |
FeatureFinderAlgorithmPickedHelperStructs::MassTraces (OpenMS) |
UnimodXMLHandler (OpenMS::Internal) |
TargetedSpectraExtractor::Match (OpenMS) |
UniqueIdGenerator (OpenMS) |
MatchedIterator (OpenMS) |
UniqueIdIndexer (OpenMS) |
Matrix (OpenMS) |
UniqueIdInterface (OpenMS) |
MaxLikeliFitter1D (OpenMS) |
CVTerm::Unit (OpenMS) |
mean_and_stddev (OpenSwath) |
UnnormalizedComparator (OpenMS) |
SysInfo::MemUsage (OpenMS) |
UnregisteredParameter (OpenMS::Exception) |
MessagePasserFactory (OpenMS::Internal) |
UpdateCheck (OpenMS) |
MetaboliteFeatureDeconvolution (OpenMS) |
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MetaboliteSpectralMatching (OpenMS) |
MetaboTargetedAssay (OpenMS) |
ValueSize< AAcid > (seqan) |
MetaDataBrowser (OpenMS) |
ValueTrait (OpenMS) |
MetaInfo (OpenMS) |
PSLPFormulation::VariableIndexLess (OpenMS) |
MetaInfoDescription (OpenMS) |
VecLowPrecision (OpenMS) |
MetaInfoDescriptionVisualizer (OpenMS) |
VersionInfo::VersionDetails (OpenMS) |
MetaInfoInterface (OpenMS) |
VersionInfo (OpenMS) |
MetaInfoInterfaceUtils (OpenMS) |
TOPPASVertex::VertexRoundPackage (OpenMS) |
MetaInfoRegistry (OpenMS) |
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MetaInfoVisualizer (OpenMS) |
LayerStatisticsDialog::MetaStatsValue_ (OpenMS) |
Weights (OpenMS::ims) |
MinimumDistance (OpenMS) |
WeightWrapper (OpenMS) |
MissedCleavages (OpenMS) |
InclusionExclusionList::WindowDistance_ (OpenMS) |
MissingInformation (OpenMS::Exception) |
WindowMower (OpenMS) |
MockFeature (OpenSwath) |
WrongParameterType (OpenMS::Exception) |
MockMRMFeature (OpenSwath) |
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MockSignalToNoise (OpenSwath) |
MockTransitionGroup (OpenSwath) |
XCorrArrayType (OpenSwath::Scoring) |
TraceFitter::ModelData (OpenMS) |
XFDRAlgorithm (OpenMS) |
ModelDescription (OpenMS) |
OPXLDataStructs::XLPrecursor (OpenMS) |
Modification (OpenMS) |
OPXLDataStructs::XLPrecursorComparator (OpenMS) |
Peptide::Modification (OpenMS::TargetedExperimentHelper) |
XMassFile (OpenMS) |
ModificationDefinition (OpenMS) |
XMLFile (OpenMS::Internal) |
ModificationDefinitionsSet (OpenMS) |
XMLHandler (OpenMS::Internal) |
MzIdentMLDOMHandler::ModificationParam (OpenMS::Internal) |
XMLValidator (OpenMS) |
ModificationsDB (OpenMS) |
XQuestResultXMLFile (OpenMS) |
ModificationVisualizer (OpenMS) |
XQuestResultXMLHandler (OpenMS::Internal) |
ModifiedNASequenceGenerator (OpenMS) |
XQuestScores (OpenMS) |
ModifiedPeptideGenerator (OpenMS) |
XTandemInfile (OpenMS) |
IdentificationData::ModifyMultiIndexAddProcessingStep (OpenMS) |
XTandemXMLFile (OpenMS) |
IdentificationData::ModifyMultiIndexAddScore (OpenMS) |
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IdentificationData::ModifyMultiIndexRemoveParentMatches (OpenMS) |
MoleculeParentMatch (OpenMS::IdentificationDataInternal) |
ZhangSimilarityScore (OpenMS) |
MoleculeQueryMatch (OpenMS::IdentificationDataInternal) |
ZlibCompression (OpenMS) |
MorpheusScore (OpenMS) |
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