OpenMS
2.5.0
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Load files containing runConcentration data. More...
#include <OpenMS/FORMAT/AbsoluteQuantitationStandardsFile.h>
Public Member Functions | |
AbsoluteQuantitationStandardsFile ()=default | |
virtual | ~AbsoluteQuantitationStandardsFile ()=default |
void | load (const String &filename, std::vector< AbsoluteQuantitationStandards::runConcentration > &run_concentrations) const |
Load runConcentration data from a file and save it in memory. More... | |
Protected Member Functions | |
AbsoluteQuantitationStandards::runConcentration | extractRunFromLine_ (const StringList &line, const std::map< String, Size > &headers) const |
Extract one runConcentration from a single line. More... | |
Load files containing runConcentration data.
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default |
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virtualdefault |
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protected |
Extract one runConcentration from a single line.
Any missing information is going to be filled with default data:
The `headers` argument makes sure that the data is taken from the correct column/position in `line`.
[in] | line | A list of strings each containing a column's info |
[in] | headers | A mapping from header name to position in the StringList given in input |
void load | ( | const String & | filename, |
std::vector< AbsoluteQuantitationStandards::runConcentration > & | run_concentrations | ||
) | const |
Load runConcentration data from a file and save it in memory.
An example of the format expected: > sample_name,component_name,IS_component_name,actual_concentration,IS_actual_concentration,concentration_units,dilution_factor > 150516_CM1_Level1,23dpg.23dpg_1.Light,23dpg.23dpg_1.Heavy,0,1,uM,1 > 150516_CM1_Level1,2mcit.2mcit_1.Light,2mcit.2mcit_1.Heavy,0,1,uM,1 > 150516_CM1_Level1,2obut.2obut_1.Light,2obut.2obut_1.Heavy,0,1,uM,1
[in] | filename | The file path from which the method is reading the data |
[out] | run_concentrations | Where the runConcentration data is going to be saved |