#include <OpenMS/ANALYSIS/ID/IDConflictResolverAlgorithm.h>
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static void | resolve (FeatureMap &features, bool keep_matching=false) |
| Resolves ambiguous annotations of features with peptide identifications. The the filtered identifications are added to the vector of unassigned peptides and also reduced to a single best hit. More...
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static void | resolve (ConsensusMap &features, bool keep_matching=false) |
| Resolves ambiguous annotations of consensus features with peptide identifications. The the filtered identifications are added to the vector of unassigned peptides and also reduced to a single best hit. More...
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static void | resolveBetweenFeatures (FeatureMap &features) |
| In a single (feature/consensus) map, features with the same (possibly modified) sequence and charge state may appear. This filter removes the peptide sequence annotations from features, if a higher-intensity feature with the same (charge, sequence) combination exists in the map. The total number of features remains unchanged. In the final output, each (charge, sequence) combination appears only once, i.e. no multiplicities. More...
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static void | resolveBetweenFeatures (ConsensusMap &features) |
| In a single (feature/consensus) map, features with the same (possibly modified) sequence and charge state may appear. This filter removes the peptide sequence annotations from features, if a higher-intensity feature with the same (charge, sequence) combination exists in the map. The total number of features remains unchanged. In the final output, each (charge, sequence) combination appears only once, i.e. no multiplicities. More...
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◆ compareIDsSmallerScores_()
◆ resolve() [1/2]
static void resolve |
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ConsensusMap & |
features, |
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bool |
keep_matching = false |
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) |
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static |
Resolves ambiguous annotations of consensus features with peptide identifications. The the filtered identifications are added to the vector of unassigned peptides and also reduced to a single best hit.
- Parameters
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keep_matching | Keeps all IDs that match the modified sequence of the best hit in the feature (e.g. keeps all IDs in a ConsensusMap if id'd same across multiple runs) |
◆ resolve() [2/2]
static void resolve |
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FeatureMap & |
features, |
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bool |
keep_matching = false |
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) |
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static |
Resolves ambiguous annotations of features with peptide identifications. The the filtered identifications are added to the vector of unassigned peptides and also reduced to a single best hit.
- Parameters
-
keep_matching | Keeps all IDs that match the modified sequence of the best hit in the feature (e.g. keeps all IDs in a ConsensusMap if id'd same across multiple runs) |
◆ resolveBetweenFeatures() [1/2]
static void resolveBetweenFeatures |
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ConsensusMap & |
features | ) |
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static |
In a single (feature/consensus) map, features with the same (possibly modified) sequence and charge state may appear. This filter removes the peptide sequence annotations from features, if a higher-intensity feature with the same (charge, sequence) combination exists in the map. The total number of features remains unchanged. In the final output, each (charge, sequence) combination appears only once, i.e. no multiplicities.
◆ resolveBetweenFeatures() [2/2]
static void resolveBetweenFeatures |
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FeatureMap & |
features | ) |
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static |
In a single (feature/consensus) map, features with the same (possibly modified) sequence and charge state may appear. This filter removes the peptide sequence annotations from features, if a higher-intensity feature with the same (charge, sequence) combination exists in the map. The total number of features remains unchanged. In the final output, each (charge, sequence) combination appears only once, i.e. no multiplicities.
◆ resolveBetweenFeatures_()
static void resolveBetweenFeatures_ |
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T & |
map | ) |
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inlinestaticprotected |
◆ resolveConflict_() [1/2]
◆ resolveConflict_() [2/2]
static void resolveConflict_ |
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T & |
map, |
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bool |
keep_matching |
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) |
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inlinestaticprotected |
◆ resolveConflictKeepMatching_()