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Public Types inherited from FeatureHandle |
typedef Int | ChargeType |
| Charge type. More...
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typedef float | WidthType |
| Feature width type. More...
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typedef float | IntensityType |
| Intensity type. More...
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typedef double | CoordinateType |
| Coordinate type (of the position) More...
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typedef DPosition< 2 > | PositionType |
| Position type. More...
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enum | DimensionDescription { RT = 0,
MZ = 1,
DIMENSION = 2
} |
| This enum maps the symbolic names of the dimensions to numbers. More...
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enum | { INVALID = 0
} |
| This is the invalid unique id (cast it to a UInt64 if you like) More...
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Public Member Functions inherited from FeatureHandle |
| FeatureHandle () |
| Default constructor. More...
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| FeatureHandle (UInt64 map_index, const Peak2D &point, UInt64 element_index) |
| Constructor with map index, element index and position. More...
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| FeatureHandle (UInt64 map_index, const BaseFeature &feature) |
| Constructor from map index and basic feature. More...
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| FeatureHandle (const FeatureHandle &rhs) |
| Copy constructor. More...
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FeatureHandle & | operator= (const FeatureHandle &rhs) |
| Assignment operator. More...
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| ~FeatureHandle () override |
| Destructor. More...
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FeatureHandleMutable_ & | asMutable () const |
| Override (most of all) constness. More...
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UInt64 | getMapIndex () const |
| Returns the map index. More...
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void | setMapIndex (UInt64 i) |
| Set the map index. More...
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void | setCharge (ChargeType charge) |
| Sets the charge. More...
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ChargeType | getCharge () const |
| Returns the charge. More...
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void | setWidth (WidthType width) |
| Sets the width (FWHM) More...
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WidthType | getWidth () const |
| Returns the width (FWHM) More...
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bool | operator== (const FeatureHandle &i) const |
| Equality operator. More...
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bool | operator!= (const FeatureHandle &i) const |
| Equality operator. More...
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Peak2D & | operator= (const Peak2D &rhs)=default |
| Assignment operator. More...
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Peak2D & | operator= (Peak2D &&) &=default |
| Move assignment operator. More...
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bool | operator== (const Peak2D &rhs) const |
| Equality operator. More...
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bool | operator!= (const Peak2D &rhs) const |
| Equality operator. More...
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| Peak2D () |
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| Peak2D (const PositionType &pos, const IntensityType in) |
| Member constructor. More...
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| Peak2D (const Peak2D &p)=default |
| Copy constructor. More...
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| Peak2D (Peak2D &&)=default |
| Move constructor. More...
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| ~Peak2D () |
| Destructor. More...
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IntensityType | getIntensity () const |
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void | setIntensity (IntensityType intensity) |
| Non-mutable access to the data point intensity (height) More...
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const PositionType & | getPosition () const |
| Non-mutable access to the position. More...
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PositionType & | getPosition () |
| Mutable access to the position. More...
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void | setPosition (const PositionType &position) |
| Mutable access to the position. More...
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CoordinateType | getMZ () const |
| Returns the m/z coordinate (index 1) More...
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void | setMZ (CoordinateType coordinate) |
| Mutable access to the m/z coordinate (index 1) More...
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CoordinateType | getRT () const |
| Returns the RT coordinate (index 0) More...
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void | setRT (CoordinateType coordinate) |
| Mutable access to the RT coordinate (index 0) More...
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| UniqueIdInterface () |
| Default constructor - the unique id will be invalid More...
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| UniqueIdInterface (const UniqueIdInterface &rhs)=default |
| Copy constructor - copies the unique id. More...
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| UniqueIdInterface (UniqueIdInterface &&rhs)=default |
| Move constructor. More...
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UniqueIdInterface & | operator= (UniqueIdInterface const &rhs)=default |
| Assignment operator - copies the unique id. More...
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UniqueIdInterface & | operator= (UniqueIdInterface &&) &=default |
| Move Assignment operator - copies the unique id. More...
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virtual | ~UniqueIdInterface ()=default |
| Destructor. More...
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bool | operator== (UniqueIdInterface const &rhs) const |
| Equality comparison operator - the unique ids must be equal (!) More...
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UInt64 | getUniqueId () const |
| Non-mutable access to unique id - returns the unique id. More...
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Size | clearUniqueId () |
| Clear the unique id. The new unique id will be invalid. Returns 1 if the unique id was changed, 0 otherwise. More...
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void | swap (UniqueIdInterface &from) |
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Size | hasValidUniqueId () const |
| Returns whether the unique id is valid. Returns 1 if the unique id is valid, 0 otherwise. More...
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Size | hasInvalidUniqueId () const |
| Returns whether the unique id is invalid. Returns 1 if the unique id is invalid, 0 otherwise. More...
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Size | setUniqueId () |
| Assigns a new, valid unique id. Always returns 1. More...
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Size | ensureUniqueId () |
| Assigns a valid unique id, but only if the present one is invalid. Returns 1 if the unique id was changed, 0 otherwise. More...
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void | setUniqueId (UInt64 rhs) |
| Assigns the given unique id. More...
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void | setUniqueId (const String &rhs) |
| Mutable access to unique id. More...
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static const char * | shortDimensionName (UInt const dim) |
| Short name of the dimension (abbreviated form) More...
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static const char * | shortDimensionNameRT () |
| Short name of the dimension (abbreviated form) More...
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static const char * | shortDimensionNameMZ () |
| Short name of the dimension (abbreviated form) More...
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static const char * | fullDimensionName (UInt const dim) |
| Full name of the dimension (self-explanatory form) More...
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static const char * | fullDimensionNameRT () |
| Full name of the dimension (self-explanatory form) More...
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static const char * | fullDimensionNameMZ () |
| Full name of the dimension (self-explanatory form) More...
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static const char * | shortDimensionUnit (UInt const dim) |
| Unit of measurement (abbreviated form) More...
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static const char * | shortDimensionUnitRT () |
| Unit of measurement (abbreviated form) More...
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static const char * | shortDimensionUnitMZ () |
| Unit of measurement (abbreviated form) More...
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static const char * | fullDimensionUnit (UInt const dim) |
| Unit of measurement (self-explanatory form) More...
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static const char * | fullDimensionUnitRT () |
| Unit of measurement (self-explanatory form) More...
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static const char * | fullDimensionUnitMZ () |
| Unit of measurement (self-explanatory form) More...
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static bool | isValid (UInt64 unique_id) |
| Returns true if the unique_id is valid, false otherwise. More...
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Protected Attributes inherited from FeatureHandle |
UInt64 | map_index_ |
| Index of the element's container. More...
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Int | charge_ |
| Charge of the feature. More...
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float | width_ |
| Width of the feature (FWHM) More...
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PositionType | position_ |
| The data point position. More...
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IntensityType | intensity_ |
| The data point intensity. More...
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UInt64 | unique_id_ |
| the unique id More...
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static const char *const | dimension_name_short_ [DIMENSION] |
| Short name of the dimension (abbreviated form) More...
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static const char *const | dimension_name_full_ [DIMENSION] |
| Full name of the dimension (self-explanatory form) More...
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static const char *const | dimension_unit_short_ [DIMENSION] |
| Unit of measurement (abbreviated form) More...
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static const char *const | dimension_unit_full_ [DIMENSION] |
| Unit of measurement (self-explanatory form) More...
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Helper class returned by FeatureHandle::asMutable(), which see.
Note that the mutators for unique id and map index are declared private. This is done because these are used by IndexLess comparator. This way it is a bit harder to use FeatureHandle::asMutable() for illegal purposes ;-)