MarkerMower Class Reference

MarkerMower uses PeakMarker to find peaks, those that are not marked get removed. More...

#include <OpenMS/FILTERING/TRANSFORMERS/MarkerMower.h>

Inheritance diagram for MarkerMower:

Public Member Functions
	MarkerMower ()
	default constructor More...
	~MarkerMower () override
	destructor More...
	MarkerMower (const MarkerMower &source)
	copy constructor More...
MarkerMower &	operator= (const MarkerMower &source)
	assignment operator More...
template<typename SpectrumType >
void	filterSpectrum (SpectrumType &spectrum)
void	filterPeakSpectrum (PeakSpectrum &spectrum)
void	filterPeakMap (PeakMap &exp)
void	insertmarker (PeakMarker *peak_marker)
	insert new Marker (violates the DefaultParamHandler interface) More...
Public Member Functions inherited from DefaultParamHandler
	DefaultParamHandler (const String &name)
	Constructor with name that is displayed in error messages. More...
	DefaultParamHandler (const DefaultParamHandler &rhs)
	Copy constructor. More...
virtual	~DefaultParamHandler ()
	Destructor. More...
virtual DefaultParamHandler &	operator= (const DefaultParamHandler &rhs)
	Assignment operator. More...
virtual bool	operator== (const DefaultParamHandler &rhs) const
	Equality operator. More...
void	setParameters (const Param &param)
	Sets the parameters. More...
const Param &	getParameters () const
	Non-mutable access to the parameters. More...
const Param &	getDefaults () const
	Non-mutable access to the default parameters. More...
const String &	getName () const
	Non-mutable access to the name. More...
void	setName (const String &name)
	Mutable access to the name. More...
const std::vector< String > &	getSubsections () const
	Non-mutable access to the registered subsections. More...

Static Public Member Functions
static const String	getProductName ()

Private Attributes
std::vector< PeakMarker * >	markers_
	used peak markers More...

Additional Inherited Members
Protected Member Functions inherited from DefaultParamHandler
virtual void	updateMembers_ ()
	This method is used to update extra member variables at the end of the setParameters() method. More...
void	defaultsToParam_ ()
	Updates the parameters after the defaults have been set in the constructor. More...
Protected Attributes inherited from DefaultParamHandler
Param	param_
	Container for current parameters. More...
Param	defaults_
	Container for default parameters. This member should be filled in the constructor of derived classes! More...
std::vector< String >	subsections_
	Container for registered subsections. This member should be filled in the constructor of derived classes! More...
String	error_name_
	Name that is displayed in error messages during the parameter checking. More...
bool	check_defaults_
	If this member is set to false no checking if parameters in done;. More...
bool	warn_empty_defaults_
	If this member is set to false no warning is emitted when defaults are empty;. More...

Detailed Description

MarkerMower uses PeakMarker to find peaks, those that are not marked get removed.

Constructor & Destructor Documentation

MarkerMower() [1/2]

MarkerMower

(

)

default constructor

~MarkerMower()

~MarkerMower ( )

override

destructor

MarkerMower() [2/2]

MarkerMower

(

const MarkerMower &

source

)

copy constructor

Member Function Documentation

filterPeakMap()

void filterPeakMap

(

PeakMap &

exp

)

filterPeakSpectrum()

void filterPeakSpectrum

(

PeakSpectrum &

spectrum

)

filterSpectrum()

void filterSpectrum ( SpectrumType &  spectrum )

inline

getProductName()

static const String getProductName ( )

inlinestatic

insertmarker()

void insertmarker

(

PeakMarker *

peak_marker

)

insert new Marker (violates the DefaultParamHandler interface)

operator=()

MarkerMower& operator=

(

const MarkerMower &

source

)

assignment operator

Member Data Documentation

markers_

std::vector<PeakMarker *> markers_

private

used peak markers