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OpenMS
FeatureMap
FeatureMap Member List
This is the complete list of members for
FeatureMap
, including all inherited members.
applyMemberFunction
(Size(Type::*member_function)())
FeatureMap
inline
applyMemberFunction
(Size(Type::*member_function)() const) const
FeatureMap
inline
Base
typedef
FeatureMap
clear
(bool clear_meta_data=true)
FeatureMap
clearMetaInfo
()
MetaInfoInterface
clearRanges
()
RangeManager< 2 >
inline
clearUniqueId
()
UniqueIdInterface
inline
ConstIterator
typedef
FeatureMap
ConstReference
FeatureMap
ConstReverseIterator
typedef
FeatureMap
createIfNotExists_
()
MetaInfoInterface
inline
protected
data_processing_
FeatureMap
protected
DIMENSION
enum value
RangeManager< 2 >
DocumentIdentifier
()
DocumentIdentifier
DocumentIdentifier
(const DocumentIdentifier &)=default
DocumentIdentifier
DocumentIdentifier
(DocumentIdentifier &&)=default
DocumentIdentifier
ensureUniqueId
()
UniqueIdInterface
inline
FeatureMap
()
FeatureMap
FeatureMap
(const FeatureMap &source)
FeatureMap
FeatureType
typedef
FeatureMap
file_path_
DocumentIdentifier
protected
file_type_
DocumentIdentifier
protected
getAnnotationStatistics
() const
FeatureMap
getBase_
() const
UniqueIdIndexer< FeatureMap >
inline
protected
getBase_
()
UniqueIdIndexer< FeatureMap >
inline
protected
getDataProcessing
() const
FeatureMap
getDataProcessing
()
FeatureMap
getIdentifier
() const
DocumentIdentifier
getKeys
(std::vector< String > &keys) const
MetaInfoInterface
getKeys
(std::vector< UInt > &keys) const
MetaInfoInterface
getLoadedFilePath
() const
DocumentIdentifier
getLoadedFileType
() const
DocumentIdentifier
getMax
() const
RangeManager< 2 >
inline
getMaxInt
() const
RangeManager< 2 >
inline
getMetaValue
(const String &name, const DataValue &default_value=DataValue::EMPTY) const
MetaInfoInterface
getMetaValue
(UInt index, const DataValue &default_value=DataValue::EMPTY) const
MetaInfoInterface
getMin
() const
RangeManager< 2 >
inline
getMinInt
() const
RangeManager< 2 >
inline
getPrimaryMSRunPath
(StringList &toFill) const
FeatureMap
getProteinIdentifications
() const
FeatureMap
getProteinIdentifications
()
FeatureMap
getUnassignedPeptideIdentifications
() const
FeatureMap
getUnassignedPeptideIdentifications
()
FeatureMap
getUniqueId
() const
UniqueIdInterface
inline
hasInvalidUniqueId
() const
UniqueIdInterface
inline
hasValidUniqueId
() const
UniqueIdInterface
inline
id_
DocumentIdentifier
protected
int_range_
RangeManager< 2 >
protected
IntensityRangeType
typedef
RangeManager< 2 >
INVALID
enum value
UniqueIdInterface
isMetaEmpty
() const
MetaInfoInterface
isValid
(UInt64 unique_id)
UniqueIdInterface
inline
static
Iterator
typedef
FeatureMap
meta_
MetaInfoInterface
protected
MetaInfoInterface
()
MetaInfoInterface
MetaInfoInterface
(const MetaInfoInterface &rhs)
MetaInfoInterface
MetaInfoInterface
(MetaInfoInterface &&) noexcept
MetaInfoInterface
metaRegistry
()
MetaInfoInterface
static
metaValueExists
(const String &name) const
MetaInfoInterface
metaValueExists
(UInt index) const
MetaInfoInterface
operator!=
(const FeatureMap &rhs) const
FeatureMap
OpenMS::MetaInfoInterface::operator!=
(const MetaInfoInterface &rhs) const
MetaInfoInterface
RangeManager< 2 >::operator!=
(const RangeManager &rhs) const
RangeManager< 2 >
inline
operator+
(const FeatureMap &rhs) const
FeatureMap
operator+=
(const FeatureMap &rhs)
FeatureMap
operator=
(const FeatureMap &rhs)
FeatureMap
OpenMS::MetaInfoInterface::operator=
(const MetaInfoInterface &rhs)
MetaInfoInterface
OpenMS::MetaInfoInterface::operator=
(MetaInfoInterface &&) noexcept
MetaInfoInterface
RangeManager< 2 >::operator=
(const RangeManager &rhs)
RangeManager< 2 >
inline
OpenMS::DocumentIdentifier::operator=
(const DocumentIdentifier &)=default
DocumentIdentifier
OpenMS::DocumentIdentifier::operator=
(DocumentIdentifier &&) &=default
DocumentIdentifier
OpenMS::UniqueIdInterface::operator=
(UniqueIdInterface const &rhs)=default
UniqueIdInterface
OpenMS::UniqueIdInterface::operator=
(UniqueIdInterface &&) &=default
UniqueIdInterface
operator==
(const FeatureMap &rhs) const
FeatureMap
OpenMS::MetaInfoInterface::operator==
(const MetaInfoInterface &rhs) const
MetaInfoInterface
RangeManager< 2 >::operator==
(const RangeManager &rhs) const
RangeManager< 2 >
inline
OpenMS::DocumentIdentifier::operator==
(const DocumentIdentifier &rhs) const
DocumentIdentifier
OpenMS::UniqueIdInterface::operator==
(UniqueIdInterface const &rhs) const
UniqueIdInterface
inline
pos_range_
RangeManager< 2 >
protected
PositionRangeType
typedef
RangeManager< 2 >
PositionType
typedef
RangeManager< 2 >
privvec
typedef
FeatureMap
protein_identifications_
FeatureMap
protected
RangeManager
()
RangeManager< 2 >
inline
RangeManager
(const RangeManager &rhs)
RangeManager< 2 >
inline
RangeManager
(RangeManager &&) noexcept=default
RangeManager< 2 >
RangeManagerType
typedef
FeatureMap
Reference
typedef
FeatureMap
removeMetaValue
(const String &name)
MetaInfoInterface
removeMetaValue
(UInt index)
MetaInfoInterface
resolveUniqueIdConflicts
()
UniqueIdIndexer< FeatureMap >
inline
ReverseIterator
typedef
FeatureMap
setDataProcessing
(const std::vector< DataProcessing > &processing_method)
FeatureMap
setIdentifier
(const String &id)
DocumentIdentifier
setLoadedFilePath
(const String &file_name)
DocumentIdentifier
setLoadedFileType
(const String &file_name)
DocumentIdentifier
setMetaValue
(const String &name, const DataValue &value)
MetaInfoInterface
setMetaValue
(UInt index, const DataValue &value)
MetaInfoInterface
setPrimaryMSRunPath
(const StringList &s)
FeatureMap
setPrimaryMSRunPath
(const StringList &s, MSExperiment &e)
FeatureMap
setProteinIdentifications
(const std::vector< ProteinIdentification > &protein_identifications)
FeatureMap
setUnassignedPeptideIdentifications
(const std::vector< PeptideIdentification > &unassigned_peptide_identifications)
FeatureMap
setUniqueId
()
UniqueIdInterface
inline
setUniqueId
(UInt64 rhs)
UniqueIdInterface
inline
setUniqueId
(const String &rhs)
UniqueIdInterface
sortByIntensity
(bool reverse=false)
FeatureMap
sortByMZ
()
FeatureMap
sortByOverallQuality
(bool reverse=false)
FeatureMap
sortByPosition
()
FeatureMap
sortByRT
()
FeatureMap
swap
(FeatureMap &from)
FeatureMap
OpenMS::DocumentIdentifier::swap
(DocumentIdentifier &from)
DocumentIdentifier
OpenMS::UniqueIdInterface::swap
(UniqueIdInterface &from)
UniqueIdInterface
inline
UniqueIdIndexer< FeatureMap >::swap
(UniqueIdIndexer &rhs)
UniqueIdIndexer< FeatureMap >
inline
swapFeaturesOnly
(FeatureMap &from)
FeatureMap
unassigned_peptide_identifications_
FeatureMap
protected
unique_id_
UniqueIdInterface
protected
uniqueid_to_index_
UniqueIdIndexer< FeatureMap >
mutable
protected
UniqueIdInterface
()
UniqueIdInterface
inline
UniqueIdInterface
(const UniqueIdInterface &rhs)=default
UniqueIdInterface
UniqueIdInterface
(UniqueIdInterface &&rhs)=default
UniqueIdInterface
UniqueIdMap
typedef
UniqueIdIndexer< FeatureMap >
uniqueIdToIndex
(UInt64 unique_id) const
UniqueIdIndexer< FeatureMap >
inline
updateRanges
() override
FeatureMap
virtual
updateRanges_
(const PeakIteratorType &begin, const PeakIteratorType &end)
RangeManager< 2 >
inline
protected
updateUniqueIdToIndex
() const
UniqueIdIndexer< FeatureMap >
inline
~DocumentIdentifier
()
DocumentIdentifier
virtual
~FeatureMap
() override
FeatureMap
~MetaInfoInterface
()
MetaInfoInterface
~RangeManager
()
RangeManager< 2 >
inline
virtual
~UniqueIdInterface
()=default
UniqueIdInterface
virtual
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